RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 HLA-DQB2P05538 268 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 TCN2P20062 427 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 GJC1P36383 396 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 STAT5AP42229 794 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 NOP2P46087 812 aaKnown RBP23.68■■□□□ 1.38
USP47-205ENST00000525257 MC1RQ01726 317 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 KIR2DS5Q14953 304 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 PAFAH1B3Q15102 231 aaKnown RBP23.68■■□□□ 1.38
USP47-205ENST00000525257 ANO6Q4KMQ2 910 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 TDRD12Q587J7 1177 aaKnown RBP23.68■■□□□ 1.38
USP47-205ENST00000525257 PHYKPLQ8IUZ5 450 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 RAVER1Q8IY67 606 aaKnown RBP23.68■■□□□ 1.38
USP47-205ENST00000525257 LYSMD1Q96S90 227 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 NUP85Q9BW27 656 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 FAM83DQ9H4H8 585 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 RMI1Q9H9A7 625 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 ARFGAP3Q9NP61 516 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 PRDM8Q9NQV8 689 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 PKD2L2Q9NZM6 624 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 MN1Q10571 1320 aaPredicted RBP23.67■■□□□ 1.38
USP47-205ENST00000525257 GRID2O43424 1007 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 GFERP55789 205 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 RPL26P61254 145 aaKnown RBP23.67■■□□□ 1.38
USP47-205ENST00000525257 DPYSL3Q14195 570 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 IFI16Q16666 785 aaKnown RBP23.67■■□□□ 1.38
USP47-205ENST00000525257 FAM71BQ8TC56 605 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 NAT10Q9H0A0 1025 aaKnown RBP23.67■■□□□ 1.38
USP47-205ENST00000525257 OSGEPL1Q9H4B0 414 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 EPB41L1Q9H4G0 881 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 HAUS2Q9NVX0 235 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 SIDT1Q9NXL6 827 aaKnown RBP23.67■■□□□ 1.38
USP47-205ENST00000525257 AMACRQ9UHK6 382 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 RPL26L1Q9UNX3 145 aaKnown RBP23.67■■□□□ 1.38
USP47-205ENST00000525257 RPS6KL1Q9Y6S9 549 aa23.67■■□□□ 1.38
USP47-205ENST00000525257 ZNF106Q9H2Y7 1883 aaKnown RBP23.66■■□□□ 1.38
USP47-205ENST00000525257 LILRA5A6NI73 299 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 NUAK1O60285 661 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 CCNCP24863 283 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 ARSEP51690 589 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 FOXM1Q08050 763 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 SEPT6Q14141 434 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 QPCTQ16769 361 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 ATP13A4Q4VNC1 1196 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 LACTB2Q53H82 288 aaPredicted RBP23.66■■□□□ 1.38
USP47-205ENST00000525257 ANKRD20A8PQ5CZ79 823 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 CCDC183Q5T5S1 534 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 ZNF648Q5T619 568 aaPredicted RBP23.66■■□□□ 1.38
USP47-205ENST00000525257 PLXDC1Q8IUK5 500 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 ESX1Q8N693 406 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 CCHCR1Q8TD31 782 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 NAP1L5Q96NT1 182 aaPredicted RBP23.66■■□□□ 1.38
USP47-205ENST00000525257 ULBP3Q9BZM4 244 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 CARD9Q9H257 536 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 ATXN10Q9UBB4 475 aa23.66■■□□□ 1.38
USP47-205ENST00000525257 OR5K4A6NMS3 321 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 ANKRD34CP0C6C1 535 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 ZNF8P17098 575 aaPredicted RBP23.65■■□□□ 1.38
USP47-205ENST00000525257 F8A1P23610 371 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 UBE2IP63279 158 aaKnown RBP23.65■■□□□ 1.38
USP47-205ENST00000525257 HADHQ16836 314 aaKnown RBP23.65■■□□□ 1.38
USP47-205ENST00000525257 HGSNATQ68CP4 663 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 CPNE8Q86YQ8 564 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 TSGA13Q96PP4 275 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 GBP4Q96PP9 640 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 PLEKHG4BQ96PX9 1271 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 MLPHQ9BV36 600 aaPredicted RBP23.65■■□□□ 1.38
USP47-205ENST00000525257 OR2AG1Q9H205 316 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 KLC4Q9NSK0 619 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 OGFRQ9NZT2 677 aa23.65■■□□□ 1.38
USP47-205ENST00000525257 UTP20O75691 2785 aaKnown RBP23.64■■□□□ 1.38
USP47-205ENST00000525257 A0A1B0GTH6 734 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 PRR19A6NJB7 356 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 ZNF28P17035 718 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 TYRP1P17643 537 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 CD86P42081 329 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 MAP7Q14244 749 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 PLA2G4EQ3MJ16 856 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 ALS2CLQ60I27 953 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 AVL9Q8NBF6 648 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 FATE1Q969F0 183 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 C9orf72Q96LT7 481 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 SCHIP1Q9P0W5 487 aaPredicted RBP23.64■■□□□ 1.37
USP47-205ENST00000525257 PLAAQ9Y263 795 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 TP53TG5Q9Y2B4 290 aa23.64■■□□□ 1.37
USP47-205ENST00000525257 USP9YO00507 2555 aaPredicted RBP23.64■■□□□ 1.37
USP47-205ENST00000525257 RGSL1A5PLK6 1076 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 ANKRD66B4E2M5 251 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 MYO1FO00160 1098 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 C9P02748 559 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 CYP1A2P05177 515 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 MMP2P08253 660 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 NR1D1P20393 614 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 DLSTP36957 453 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 SEPHS1P49903 392 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 GBE1Q04446 702 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 GALNT3Q14435 633 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 CRTC2Q53ET0 693 aaPredicted RBP23.63■■□□□ 1.37
USP47-205ENST00000525257 ZNF569Q5MCW4 686 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 CRTC3Q6UUV7 619 aa23.63■■□□□ 1.37
USP47-205ENST00000525257 KCTD6Q8NC69 237 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms