RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ASB12Q8WXK4 309 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 OR1E3Q8WZA6 343 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 ATOH1Q92858 354 aaPredicted RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 ZNF669Q96BR6 464 aaPredicted RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 AP2M1Q96CW1 435 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 COX14Q96I36 57 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 SPACA7Q96KW9 195 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 EBNA1BP2Q99848 306 aaKnown RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 APOOQ9BUR5 198 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 PARD6BQ9BYG5 372 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 FAM126AQ9BYI3 521 aaPredicted RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 FAM83DQ9H4H8 585 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 FGF22Q9HCT0 170 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 GPR27Q9NS67 375 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 TM7SF3Q9NS93 570 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 NINJ2Q9NZG7 142 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 PLA2G2EQ9NZK7 142 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 GALPQ9UBC7 116 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 SMG5Q9UPR3 1016 aaKnown RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 MAD1L1Q9Y6D9 718 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 ADAMTS9Q9P2N4 1935 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 TRBV5-4A0A0C4DH59 114 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 HEATR9A2RTY3 570 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 GOLGA6CA6NDK9 693 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 GOLGA6BA6NDN3 693 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SDR42E2A6NKP2 422 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 PSMD11O00231 422 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CASC3O15234 703 aaKnown RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 PPFIA2O75334 1257 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 ZNF189O75820 626 aaPredicted RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 FAM155BO75949 473 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SRP72O76094 671 aaKnown RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 EPN2O95208 641 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 VAPBO95292 243 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CEACAM5P06731 702 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 GOLGA6DP0CG33 693 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 ERVK-10P10266 1014 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 ZNF30P17039 623 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 MC4RP32245 332 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 TRIM23P36406 574 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SPAM1P38567 509 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 NBL1P41271 181 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 MAGEA4P43358 317 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SUOXP51687 545 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CTSCP53634 463 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 ARL4CP56559 192 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CDK3Q00526 305 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 TIAL1Q01085 375 aaKnown RBP eCLIP6.43□□□□□ -1.38
CD44-214ENST00000525211 NHLH1Q02575 133 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SGCGQ13326 291 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 FZD2Q14332 565 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CRYMQ14894 314 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 UAP1Q16222 522 aaPredicted RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 DBN1Q16643 649 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 HIF1AQ16665 826 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 KYNUQ16719 465 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 KIF19Q2TAC6 998 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 PEAR1Q5VY43 1037 aaPredicted RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 RAET1GQ6H3X3 334 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CCDC70Q6NSX1 233 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CASC4Q6P4E1 433 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 ZC3H14Q6PJT7 736 aaKnown RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 DOK6Q6PKX4 331 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 NAPRTQ6XQN6 538 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CENPUQ71F23 418 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 MARK2Q7KZI7 788 aaKnown RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 CYP2U1Q7Z449 544 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 PTAR1Q7Z6K3 402 aaPredicted RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 PCGF5Q86SE9 256 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 ADGRG6Q86SQ4 1221 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 TMEM135Q86UB9 458 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 DENND6AQ8IWF6 608 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 RGL4Q8IZJ4 473 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 RBFAQ8N0V3 343 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 LILRA3Q8N6C8 439 aaPredicted RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 CCL4L1Q8NHW4 92 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 CCHCR1Q8TD31 782 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 TSACCQ96A04 125 aaPredicted RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 STAMBPL1Q96FJ0 436 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 PDXPQ96GD0 296 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SPATA16Q9BXB7 569 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 TEX101Q9BY14 249 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 IL22Q9GZX6 179 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 RAB17Q9H0T7 212 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SEMA4AQ9H3S1 761 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 TRABDQ9H4I3 376 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 XAB2Q9HCS7 855 aaKnown RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 AASDHPPTQ9NRN7 309 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 HAUS2Q9NVX0 235 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 GOLGA6AQ9NYA3 693 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 BFARQ9NZS9 450 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 ATXN10Q9UBB4 475 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SLC23A2Q9UGH3 650 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 SNX11Q9Y5W9 270 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 PSAT1Q9Y617 370 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 PCDH15Q96QU1 1955 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 PI4KAP42356 2102 aa6.43□□□□□ -1.38
CD44-214ENST00000525211 ZNF106Q9H2Y7 1883 aaKnown RBP6.43□□□□□ -1.38
CD44-214ENST00000525211 GLYATL1P3A0A0U1RQE8 302 aa6.42□□□□□ -1.38
CD44-214ENST00000525211 FAM237BA0A1B0GVD1 139 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms