RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PCDHA3Q9Y5H8 950 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 SPO11Q9Y5K1 396 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 LOC400499M0QZD8 3231 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 AURKAO14965 403 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 PPM1DO15297 605 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 BPIP17213 487 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 CTNNA2P26232 953 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 GPR3P46089 330 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 DCDC1P59894 354 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 CXADRP78310 365 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 ZFP36L1Q07352 338 aaKnown RBP18.37■□□□□ 0.53
CAPN1-203ENST00000525013 NOMO1Q15155 1222 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 KDELC1Q6UW63 502 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 TMPRSS9Q7Z410 1059 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 TRAM1L1Q8N609 369 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 IPMKQ8NFU5 416 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 SLC37A2Q8TED4 501 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 CCDC97Q96F63 343 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-203ENST00000525013 BAG1Q99933 345 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-203ENST00000525013 FERMT1Q9BQL6 677 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 DPH1Q9BZG8 443 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 CARD9Q9H257 536 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 SEMA6CQ9H3T2 930 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 C10orf88Q9H8K7 445 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 BPIFA1Q9NP55 256 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 KCNK4Q9NYG8 393 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 ATXN10Q9UBB4 475 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 RSPH14Q9UHP6 348 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 TRHDEQ9UKU6 1024 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 KCNK6Q9Y257 313 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 LOXL2Q9Y4K0 774 aa18.37■□□□□ 0.53
CAPN1-203ENST00000525013 BTNL10A8MVZ5 291 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 APOC4-APOC2K7ER74 178 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 GRID2O43424 1007 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 NUAK1O60285 661 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 SNX2O60749 519 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 EML2O95834 649 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 APOC2P02655 101 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 ZNF8P17098 575 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-203ENST00000525013 CETN2P41208 172 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 VAV2P52735 878 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 XRCC4Q13426 336 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 NR1D2Q14995 579 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 SOWAHCQ53LP3 525 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-203ENST00000525013 SIRPB2Q5JXA9 342 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 NKAIN2Q5VXU1 208 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 CLEC14AQ86T13 490 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 SLITRK4Q8IW52 837 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 ACTL9Q8TC94 416 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 GLYATL1Q969I3 302 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 OXNAD1Q96HP4 312 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-203ENST00000525013 FCRL5Q96RD9 977 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 CMKLR1Q99788 373 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 NUDT22Q9BRQ3 303 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 OSBPL8Q9BZF1 889 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 ZMYND15Q9H091 742 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 TRIM39Q9HCM9 518 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 TBC1D29Q9UFV1 150 aa18.36■□□□□ 0.53
CAPN1-203ENST00000525013 LOC285095A0A1B0GVY8 99 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 EPOP01588 193 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 RBL1P28749 1068 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 CD1CP29017 333 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 SLC5A2P31639 672 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 CHRNA4P43681 627 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 RWDD2BP57060 319 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
CAPN1-203ENST00000525013 MPP3Q13368 585 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 PDPK2PQ6A1A2 396 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 CRTC3Q6UUV7 619 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 GPR155Q7Z3F1 870 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 ZNF761Q86XN6 746 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-203ENST00000525013 PHYKPLQ8IUZ5 450 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 SPC24Q8NBT2 197 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 TMEM159Q96B96 161 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 MRGPRX2Q96LB1 330 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 SLC38A3Q99624 504 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 HERPUD2Q9BSE4 406 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 TRABDQ9H4I3 376 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 CPNE5Q9HCH3 593 aa18.35■□□□□ 0.53
CAPN1-203ENST00000525013 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.35■□□□□ 0.53
CAPN1-203ENST00000525013 AKAP7Q9P0M2 348 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-203ENST00000525013 NFKBIL1Q9UBC1 381 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-203ENST00000525013 FASNP49327 2511 aaKnown RBP18.34■□□□□ 0.53
CAPN1-203ENST00000525013 IGHV1OR21-1A0A087WYE8 117 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 GRID2IPA4D2P6 1211 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 PJA2O43164 708 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 PTMAP06454 111 aaKnown RBP18.34■□□□□ 0.53
CAPN1-203ENST00000525013 ITIH1P19827 911 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 FASLGP48023 281 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 MAPK10P53779 464 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 UCNP55089 124 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 TMPRSS3P57727 454 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 EIF3EP60228 445 aaKnown RBP18.34■□□□□ 0.53
CAPN1-203ENST00000525013 SLC1A5Q15758 541 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 CLPPQ16740 277 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-203ENST00000525013 ADGRG6Q86SQ4 1221 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 CDKL3Q8IVW4 592 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-203ENST00000525013 SFRP1Q8N474 314 aa18.34■□□□□ 0.53
CAPN1-203ENST00000525013 GDAP1Q8TB36 358 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms