RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 VOPP1Q96AW1 172 aa15.17■□□□□ 0.02
BEST1-204ENST00000524926 SCRN2Q96FV2 425 aa15.17■□□□□ 0.02
BEST1-204ENST00000524926 CPEB1Q9BZB8 566 aaKnown RBP15.17■□□□□ 0.02
BEST1-204ENST00000524926 CLPBQ9H078 707 aa15.17■□□□□ 0.02
BEST1-204ENST00000524926 IKZF3Q9UKT9 509 aa15.17■□□□□ 0.02
BEST1-204ENST00000524926 COMMD10Q9Y6G5 202 aa15.17■□□□□ 0.02
BEST1-204ENST00000524926 TRPC5OSA6NMA1 111 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 KERAO60938 352 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 PGM1P36871 562 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 SPAM1P38567 509 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 GEN1Q17RS7 908 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 TPRG1Q6ZUI0 275 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 CPNE9Q8IYJ1 553 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 CELF5Q8N6W0 485 aaKnown RBP15.16■□□□□ 0.02
BEST1-204ENST00000524926 GIMAP7Q8NHV1 300 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 GRIN3AQ8TCU5 1115 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 ECHDC3Q96DC8 303 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 CMTM5Q96DZ9 223 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 LINGO1Q96FE5 620 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 LRRC3BQ96PB8 259 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 TRMOQ9BU70 441 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 BOCQ9BWV1 1114 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 P2RY12Q9H244 342 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 TNFRSF12AQ9NP84 129 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 DUS2Q9NX74 493 aaKnown RBP15.16■□□□□ 0.02
BEST1-204ENST00000524926 CRLS1Q9UJA2 301 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 ERVW-1Q9UQF0 538 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 GBF1Q92538 1859 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 NPEPPSL1A6NEC2 478 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 CA5AP35218 305 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 NNMTP40261 264 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 MNAT1P51948 309 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 COPAP53621 1224 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 GALNT1Q10472 559 aaPredicted RBP15.16■□□□□ 0.02
BEST1-204ENST00000524926 DHCR24Q15392 516 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 CHRNA6Q15825 494 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 LRRC73Q5JTD7 316 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 LRRC66Q68CR7 880 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 TRIM68Q6AZZ1 485 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 GRAMD4Q6IC98 578 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 CCDC97Q96F63 343 aaPredicted RBP15.16■□□□□ 0.02
BEST1-204ENST00000524926 ZNF641Q96N77 438 aaPredicted RBP15.16■□□□□ 0.02
BEST1-204ENST00000524926 CIPCQ9C0C6 399 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 PCDHB1Q9Y5F3 818 aa15.16■□□□□ 0.02
BEST1-204ENST00000524926 RANBP2P49792 3224 aaKnown RBP15.16■□□□□ 0.02
BEST1-204ENST00000524926 NCF1BA6NI72 391 aaPredicted RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 SYCE1LA8MT33 242 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 NCF1CA8MVU1 366 aaPredicted RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 MEI4A8MW99 385 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 UBFD1O14562 309 aaKnown RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 CHRM1P11229 460 aaPredicted RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 NCF1P14598 390 aaPredicted RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 TCF3P15923 654 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 CD9P21926 228 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 VIPR2P41587 438 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 KLF10Q13118 480 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 ARHGAP24Q8N264 748 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 FBXO39Q8N4B4 442 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 OR2A12Q8NGT7 310 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 FAR2Q96K12 515 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 KLHL32Q96NJ5 620 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 LYSMD1Q96S90 227 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 CCDC28BQ9BUN5 200 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 HTATIP2Q9BUP3 242 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 CD248Q9HCU0 757 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 MARK1Q9P0L2 795 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 TRAF6Q9Y4K3 522 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 LRRC14BA6NHZ5 514 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 ECI2O75521 394 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 ITGB6P18564 788 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 NRIP1P48552 1158 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 ERVK-21P61565 698 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 SHHQ15465 462 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 EML3Q32P44 896 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 TMEM198Q66K66 360 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 GDPD4Q6W3E5 623 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 RBFAQ8N0V3 343 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 CLDN19Q8N6F1 224 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 GPR26Q8NDV2 337 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 AGAP11Q8TF27 550 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 FUBP1Q96AE4 644 aaKnown RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 SAMD11Q96NU1 681 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 CATSPER2Q96P56 530 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 THTPAQ9BU02 230 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 SLC2A11Q9BYW1 496 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 DENND2DQ9H6A0 471 aaPredicted RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 BRD9Q9H8M2 597 aa15.15■□□□□ 0.02
BEST1-204ENST00000524926 TSR3Q9UJK0 312 aaKnown RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.15■□□□□ 0.02
BEST1-204ENST00000524926 TTC34A8MYJ7 566 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 TSPAN12O95859 305 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 ACRV1P26436 265 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 CLCN7P51798 805 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 PTSQ03393 145 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 BTKQ06187 659 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 DNAL1Q4LDG9 190 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 FBXO48Q5FWF7 155 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 CLEC6AQ6EIG7 209 aa15.14■□□□□ 0.01
BEST1-204ENST00000524926 CBARPQ8N350 705 aaPredicted RBP15.14■□□□□ 0.01
BEST1-204ENST00000524926 C19orf43Q9BQ61 176 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms