RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ENTPD3O75355 529 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 GH2P01242 217 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 T-ENOLP0DO92 83 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 NR2F1P10589 423 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 VPREB1P12018 145 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 SELLP14151 372 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 MMP9P14780 707 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 LMO1P25800 156 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 ACADLP28330 430 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 HOXA11P31270 313 aaPredicted RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 COMPP49747 757 aaPredicted RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 LIG4P49917 911 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 ARSEP51690 589 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 TMF1P82094 1093 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 BECN1Q14457 450 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 SLC39A14Q15043 492 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 OASLQ15646 514 aaKnown RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 DECR1Q16698 335 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 TMEM266Q2M3C6 531 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 ZDHHC20Q5W0Z9 365 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 CREB3L2Q70SY1 520 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 GALNT5Q7Z7M9 940 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 KBTBD6Q86V97 674 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 BEST3Q8N1M1 668 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 CLIP4Q8N3C7 705 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 UTP15Q8TED0 518 aaKnown RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 LRRC59Q96AG4 307 aaKnown RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 MIB2Q96AX9 1013 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 SLC22A18Q96BI1 424 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 PHF21BQ96EK2 531 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 EGLN2Q96KS0 407 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 CSF3RQ99062 836 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 PAFAH2Q99487 392 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 MRPL1Q9BYD6 325 aaKnown RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 RTN4RQ9BZR6 473 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 SEBOXQ9HB31 216 aaPredicted RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 PCDH9Q9HC56 1237 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 PLSCR4Q9NRQ2 329 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 OCIAD1Q9NX40 245 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 TAB2Q9NYJ8 693 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 SMARCAL1Q9NZC9 954 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 TINAGQ9UJW2 476 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 KLHL20Q9Y2M5 609 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 AMDHD2Q9Y303 409 aa3.88□□□□□ -1.79
SKP1-212ENST00000523966 MAGED1Q9Y5V3 778 aaPredicted RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.88□□□□□ -1.79
SKP1-212ENST00000523966 IGLV5-52A0A0A0MRZ9 124 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 GLOD5A6NK44 160 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 H0YIN7 160 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 CLGNO14967 610 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 ERAL1O75616 437 aaKnown RBP3.87□□□□□ -1.79
SKP1-212ENST00000523966 RFPL2O75678 378 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 RSL1D1O76021 490 aaKnown RBP3.87□□□□□ -1.79
SKP1-212ENST00000523966 KCNK5O95279 499 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 TPOP07202 933 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 FCGR1AP12314 374 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 IL15P40933 162 aaPredicted RBP3.87□□□□□ -1.79
SKP1-212ENST00000523966 TMPOP42166 694 aaKnown RBP3.87□□□□□ -1.79
SKP1-212ENST00000523966 AMPHP49418 695 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 HSD17B4P51659 736 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 PNLIPRP2P54317 469 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 PPP2R2BQ00005 443 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 MYBPHQ13203 477 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 TNFAIP1Q13829 316 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 PCLAFQ15004 111 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 MEP1AQ16819 746 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 TMEM35AQ53FP2 167 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 PAPPA-AS1Q5QFB9 102 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 FAM69BQ5VUD6 431 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 NSUN5P2Q63ZY6 315 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 TMEM198Q66K66 360 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 C18orf63Q68DL7 685 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 PAPD4Q6PIY7 484 aaKnown RBP3.87□□□□□ -1.79
SKP1-212ENST00000523966 RHBDF2Q6PJF5 856 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 CLEC17AQ6ZS10 378 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 TPRG1Q6ZUI0 275 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 GLCCI1Q86VQ1 547 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 RNF113BQ8IZP6 322 aaKnown RBP3.87□□□□□ -1.79
SKP1-212ENST00000523966 PELI3Q8N2H9 469 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 LSMEM1Q8N8F7 131 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 THAP6Q8TBB0 222 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 TANKQ92844 425 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 ZBTB9Q96C00 473 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 RTP4Q96DX8 246 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 CDCA5Q96FF9 252 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 CEP295NLQ96MC4 621 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 GCNAQ96QF7 691 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 SMC6Q96SB8 1091 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 FIZ1Q96SL8 496 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 DDOQ99489 341 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 ZPBPQ9BS86 351 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 PAG1Q9NWQ8 432 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 DNAJB4Q9UDY4 337 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 SIX4Q9UIU6 781 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 VDAC3Q9Y277 283 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 PCDHGA5Q9Y5G8 931 aa3.87□□□□□ -1.79
SKP1-212ENST00000523966 ARHGEF40Q8TER5 1519 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 hCG_1809904A0A1W2PP81 198 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 A0A1W2PPE2 198 aa3.86□□□□□ -1.79
SKP1-212ENST00000523966 A0A1W2PR64 198 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms