RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 MROH6A6NGR9 719 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 DNALI1O14645 258 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 TNFRSF10CO14798 259 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 YY2O15391 372 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 SIGLEC6O43699 453 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 DNAJC6O75061 913 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 SRP72O76094 671 aaKnown RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 IVLP07476 585 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 ZNF8P17098 575 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 SDHBP21912 280 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 AK4P27144 223 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 MC4RP32245 332 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 GRK6P43250 576 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 BLKP51451 505 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 PLA2G4EQ3MJ16 856 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 TSTD2Q5T7W7 516 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 RNASEH2BQ5TBB1 312 aaKnown RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 IZUMO3Q5VZ72 239 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 ZDHHC20Q5W0Z9 365 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 CRTC3Q6UUV7 619 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 CES3Q6UWW8 571 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 SFTPA2Q8IWL1 248 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 PNPLA1Q8N8W4 532 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 NAT8LQ8N9F0 302 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 PPHLN1Q8NEY8 458 aaKnown RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 GDAP1Q8TB36 358 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 ZNF398Q8TD17 642 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 STYXQ8WUJ0 223 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 CDKN2AIPNLQ96HQ2 116 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
VEGFA-224ENST00000523873 VPS35Q96QK1 796 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 OR2M4Q96R27 311 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 RANBP9Q96S59 729 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 OR2AG1Q9H205 316 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 SLC32A1Q9H598 525 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 ASB8Q9H765 288 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 CDC23Q9UJX2 597 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 ST14Q9Y5Y6 855 aa12.7□□□□□ -0.38
VEGFA-224ENST00000523873 HEATR9A2RTY3 570 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 CCDC162PA2VCL2 907 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 RAD51CO43502 376 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PPFIA2O75334 1257 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 ADRA1DP25100 572 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 IVDP26440 423 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 NMBRP28336 390 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PDE1BQ01064 536 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 DNAJC3Q13217 504 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 TRIP6Q15654 476 aaKnown RBP12.69□□□□□ -0.38
VEGFA-224ENST00000523873 SMAD1Q15797 465 aaKnown RBP12.69□□□□□ -0.38
VEGFA-224ENST00000523873 INAVAQ3KP66 663 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PYCR3Q53H96 274 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 CCDC157Q569K6 752 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 ZRANB3Q5FWF4 1079 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PPM1JQ5JR12 505 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PCID2Q5JVF3 399 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 GPRC6AQ5T6X5 926 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PDPK2PQ6A1A2 396 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 TAF8Q7Z7C8 310 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 NRROSQ86YC3 692 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PHYKPLQ8IUZ5 450 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PPIL6Q8IXY8 311 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 AGGF1Q8N302 714 aaeCLIP12.69□□□□□ -0.38
VEGFA-224ENST00000523873 OR13J1Q8NGT2 312 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 OR4C6Q8NH72 309 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 SCARF2Q96GP6 870 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-224ENST00000523873 PWWP2AQ96N64 755 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 RUNDC3BQ96NL0 473 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 SERPINB12Q96P63 405 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 TRIM56Q9BRZ2 755 aaKnown RBP12.69□□□□□ -0.38
VEGFA-224ENST00000523873 TRIM39Q9HCM9 518 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 CHRAC1Q9NRG0 131 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 BFARQ9NZS9 450 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 SIRPGQ9P1W8 387 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 FTSJ1Q9UET6 329 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 ZNHIT2Q9UHR6 403 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 CRLS1Q9UJA2 301 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 DOLKQ9UPQ8 538 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 CFAP54Q96N23 3096 aa12.69□□□□□ -0.38
VEGFA-224ENST00000523873 DMXL1Q9Y485 3027 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 NUAK1O60285 661 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 BANF1O75531 89 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 LDOC1O95751 146 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-224ENST00000523873 GOT2P00505 430 aaKnown RBP12.68□□□□□ -0.38
VEGFA-224ENST00000523873 ANXA6P08133 673 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 HADHAP40939 763 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 NPY2RP49146 381 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 CDK16Q00536 496 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 CTBSQ01459 385 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 CKAP4Q07065 602 aaKnown RBP12.68□□□□□ -0.38
VEGFA-224ENST00000523873 NFATC2Q13469 925 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 DHX34Q14147 1143 aaKnown RBP12.68□□□□□ -0.38
VEGFA-224ENST00000523873 ELOCQ15369 112 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 SLC30A9Q6PML9 568 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 DET1Q7L5Y6 550 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 CHST15Q7LFX5 561 aaPredicted RBP12.68□□□□□ -0.38
VEGFA-224ENST00000523873 SNX20Q7Z614 316 aa12.68□□□□□ -0.38
VEGFA-224ENST00000523873 GALNT13Q8IUC8 556 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms