RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 Q8NA96 180 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 RSC1A1Q92681 617 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 MR1Q95460 341 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 SCARF2Q96GP6 870 aaPredicted RBP11.49□□□□□ -0.57
SDCBP-211ENST00000523441 PLEKHG4BQ96PX9 1271 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 NAA15Q9BXJ9 866 aaKnown RBP11.49□□□□□ -0.57
SDCBP-211ENST00000523441 STK33Q9BYT3 514 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 KLC4Q9NSK0 619 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 KCTD5Q9NXV2 234 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 SLC5A6Q9Y289 635 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 DNAJC16Q9Y2G8 782 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 SIK3Q9Y2K2 1263 aa11.49□□□□□ -0.57
SDCBP-211ENST00000523441 MN1Q10571 1320 aaPredicted RBP11.49□□□□□ -0.57
SDCBP-211ENST00000523441 SIGLEC16A6NMB1 481 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 PDZK1P1A8MUH7 402 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 HTRA2O43464 458 aaPredicted RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 DPM1O60762 260 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 DNAJC6O75061 913 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 SOCS5O75159 536 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 PGLSO95336 258 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 CALB1P05937 261 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 PRF1P14222 555 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 SLC2A4P14672 509 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 ZNF143P52747 638 aaPredicted RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 PPP1CAP62136 330 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 RPS15P62841 145 aaKnown RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 OGDHQ02218 1023 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 TUBB3Q13509 450 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 RFTN1Q14699 578 aaPredicted RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 SYCP1Q15431 976 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 TDRD12Q587J7 1177 aaKnown RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 SLC6A19Q695T7 634 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 PWWP2BQ6NUJ5 590 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 CERS6Q6ZMG9 384 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 RFX8Q6ZV50 586 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 ZNF677Q86XU0 584 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 PHYKPLQ8IUZ5 450 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 FDCSPQ8NFU4 85 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 EXD1Q8NHP7 514 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 ZNF653Q96CK0 615 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 MOCOSQ96EN8 888 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 SCRN2Q96FV2 425 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 PSKH2Q96QS6 385 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 NUDCD1Q96RS6 583 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 HERPUD2Q9BSE4 406 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 CNPY3Q9BT09 278 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 MLPHQ9BV36 600 aaPredicted RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 SNRNP25Q9BV90 132 aaKnown RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 NUDT9Q9BW91 350 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 NT5MQ9NPB1 228 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 FAM207AQ9NSI2 230 aaPredicted RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 IGSF5Q9NSI5 407 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 ASF1BQ9NVP2 202 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 SCHIP1Q9P0W5 487 aaPredicted RBP11.48□□□□□ -0.57
SDCBP-211ENST00000523441 ZNF451Q9Y4E5 1061 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 TTLL3Q9Y4R7 772 aa11.48□□□□□ -0.57
SDCBP-211ENST00000523441 PSMD11O00231 422 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 GRID2O43424 1007 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 CLDN7O95471 211 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 C9P02748 559 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 MT-ND3P03897 115 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 ANKRD34CP0C6C1 535 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 UNGP13051 313 aaPredicted RBP11.47□□□□□ -0.57
SDCBP-211ENST00000523441 DESP17661 470 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 PSMA2P25787 234 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
SDCBP-211ENST00000523441 PTPN4P29074 926 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 ARL4DP49703 201 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 PTSQ03393 145 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 DPTQ07507 201 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 IL11RAQ14626 422 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 UGT8Q16880 541 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 INSCQ1MX18 579 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 CLEC16AQ2KHT3 1053 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 RBMXL3Q8N7X1 1067 aaKnown RBP11.47□□□□□ -0.57
SDCBP-211ENST00000523441 SIDT2Q8NBJ9 832 aaKnown RBP11.47□□□□□ -0.57
SDCBP-211ENST00000523441 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 C3orf20Q8ND61 904 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 SNRNP40Q96DI7 357 aaKnown RBP11.47□□□□□ -0.57
SDCBP-211ENST00000523441 COX14Q96I36 57 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 PEBP4Q96S96 227 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 UNKQ9C0B0 810 aaKnown RBP11.47□□□□□ -0.57
SDCBP-211ENST00000523441 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 PDE7BQ9NP56 450 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 TAB2Q9NYJ8 693 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 ITGB1BP2Q9UKP3 347 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 RARRES3Q9UL19 164 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 G3BP2Q9UN86 482 aaKnown RBP11.47□□□□□ -0.57
SDCBP-211ENST00000523441 PCDHGA6Q9Y5G7 932 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
SDCBP-211ENST00000523441 MDC1Q14676 2089 aaKnown RBP11.47□□□□□ -0.57
SDCBP-211ENST00000523441 KIR2DS5A0A0G2JLQ3 304 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 A0A0G2JNG1 304 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 ANKUB1A6NFN9 424 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 LILRA5A6NI73 299 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 FADS2P1A8MWK0 482 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 TMCO5BA8MYB1 307 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 C21orf140B9A014 251 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms