RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CREB3O43889 395 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 RAD1O60671 282 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 VPS4BO75351 444 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ZNF821O75541 412 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ZMPSTE24O75844 475 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 HOXA5P20719 270 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ERCC5P28715 1186 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 EPHB2P29323 1055 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 FLT3P36888 993 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ETV5P41161 510 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 CASRP41180 1078 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 KIAA1024LP59773 190 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 SRSF1Q07955 248 aaKnown RBP eCLIP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 TRA2AQ13595 282 aaKnown RBP eCLIP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ACOX1Q15067 660 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 CLPPQ16740 277 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 TMEM52BQ4KMG9 183 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 LACTB2Q53H82 288 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 DCAF12Q5T6F0 453 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 SLC47A2Q86VL8 602 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 XYLT1Q86Y38 959 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 LURAP1LQ8IV03 231 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ZNF683Q8IZ20 524 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 TEX19Q8NA77 164 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 PHC3Q8NDX5 983 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 GPR156Q8NFN8 814 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ART4Q93070 314 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 CCDC74BQ96LY2 380 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 TEFMQ96QE5 360 aaKnown RBP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 FUCA2Q9BTY2 467 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 SELENOOQ9BVL4 669 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 CINPQ9BW66 212 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 B3GNT4Q9C0J1 378 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 CDH19Q9H159 772 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ZNF552Q9H707 407 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 RDH14Q9HBH5 336 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 GCM1Q9NP62 436 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 PCDH12Q9NPG4 1184 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 SEPT11Q9NVA2 429 aaKnown RBP6.24□□□□□ -1.41
PABPC1-220ENST00000522658 KCTD5Q9NXV2 234 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 SLC39A1Q9NY26 324 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 DKK3Q9UBP4 350 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 VPS4AQ9UN37 437 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ATP8A1Q9Y2Q0 1164 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 ACTL7AQ9Y615 435 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 DGKBQ9Y6T7 804 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 FAM221AA4D161 298 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 GTPBP10A4D1E9 387 aaKnown RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 ARHGAP42A6NI28 874 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 EFCAB7A8K855 629 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 BECN2A8MW95 431 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 MKRN2OSH3BPM6 223 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 RNF103O00237 685 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 TNFRSF10CO14798 259 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 INPP4BO15327 924 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 FGF10O15520 208 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 DAPK3O43293 454 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 KDELR3O43731 214 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 NOBOXO60393 691 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 SEMA7AO75326 666 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 AGFG2O95081 481 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 PLEKP08567 350 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 PNMA6AP0CW24 399 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 CCNB1P14635 433 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 LIFP15018 202 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 CYP11B1P15538 503 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 SLC9A1P19634 815 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 CR2P20023 1033 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 TCN2P20062 427 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 MMP12P39900 470 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 NSFP46459 744 aaKnown RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 GNPDA1P46926 289 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 GABRB2P47870 512 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 MAZP56270 477 aaKnown RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 OR1D5P58170 312 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 YBEYP58557 167 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 POLR2LP62875 67 aaKnown RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 TEKQ02763 1124 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 ZFP36L1Q07352 338 aaKnown RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 BCL2L1Q07817 233 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 CDC20Q12834 499 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 SERINC3Q13530 473 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 HLTFQ14527 1009 aaKnown RBP eCLIP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 CLCA4Q14CN2 919 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 UGP2Q16851 508 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 WSCD2Q2TBF2 565 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 PARP15Q460N3 678 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 INO80DQ53TQ3 878 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 SNAP47Q5SQN1 464 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 OTUD1Q5VV17 481 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-220ENST00000522658 NAA35Q5VZE5 725 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 DENND2CQ68D51 928 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 RAET1GQ6H3X3 334 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 SCYL2Q6P3W7 929 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 SLC30A9Q6PML9 568 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 CEACAM20Q6UY09 585 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 SLITRK4Q8IW52 837 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 NLGN4XQ8N0W4 816 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 BBS5Q8N3I7 341 aa6.23□□□□□ -1.41
PABPC1-220ENST00000522658 EMC1Q8N766 993 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms