RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 YTHDF3Q7Z739 585 aaKnown RBP16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 APOLD1Q96LR9 279 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 SUV39H1O43463 412 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 LMO2P25791 158 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 CDKN2BP42772 138 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 TRIM32Q13049 653 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 SEMA5AQ13591 1074 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 MSANTD2Q6P1R3 559 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 ZNF490Q9ULM2 529 aaPredicted RBP16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 POLR3HQ9Y535 204 aaPredicted RBP16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 C2CD4BA6NLJ0 364 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 H0YC42 278 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 GDI1P31150 447 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 UBXN11Q5T124 520 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 GALNT18Q6P9A2 607 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 SPATA19Q7Z5L4 167 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 RNPEPL1Q9HAU8 725 aa16.16■□□□□ 0.18
PCDHA3-201ENST00000522353 EFCAB10A6NFE3 127 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 CLDN9O95484 217 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 ECDO95905 644 aaPredicted RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 ESR1P03372 595 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 MAT2AP31153 395 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 HNMTP50135 292 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 ZNF132P52740 706 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 GRB14Q14449 540 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 GDF6Q6KF10 455 aaPredicted RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 TMC8Q8IU68 726 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 PYDC1Q8WXC3 89 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 LRTM1Q9HBL6 345 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 RICTORQ6R327 1708 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 MFN2O95140 757 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 TOP3BO95985 862 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 SERPINA6P08185 405 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 KIR3DL1P43629 444 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 FAM171BQ6P995 826 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 C10orf107Q8IVU9 208 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 FBXW8Q8N3Y1 598 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 RPL10LQ96L21 214 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 C5orf34Q96MH7 638 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 HAPLN3Q96S86 360 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 RAB11FIP5Q9BXF6 653 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 IFNGP01579 166 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 CCNA2P20248 432 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 EPHA3P29320 983 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 NSG1P42857 185 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 MED27Q6P2C8 311 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 TSSK3Q96PN8 268 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 CAB39LQ9H9S4 337 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 NECTIN3Q9NQS3 549 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 CHRAC1Q9NRG0 131 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 RHBDL2Q9NX52 303 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 TLR6Q9Y2C9 796 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 YJEFN3A6XGL0 299 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 KPNA4O00629 521 aaPredicted RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 UGT1A5P35504 534 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 PTGER3P43115 390 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 STXBP1P61764 594 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 SLC25A3Q00325 362 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 ZNF57Q68EA5 555 aaPredicted RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 SPESP1Q6UW49 350 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 CHST15Q7LFX5 561 aaPredicted RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 SERPINA9Q86WD7 417 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 CELF5Q8N6W0 485 aaKnown RBP16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 TEX47Q8TBZ9 253 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 PSMG2Q969U7 264 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 GRIP2Q9C0E4 1043 aa16.15■□□□□ 0.18
PCDHA3-201ENST00000522353 NT5EP21589 574 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 ACTR3P61158 418 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 TMEM220Q6QAJ8 160 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 MAGEE2Q8TD90 523 aaPredicted RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 KCTD13Q8WZ19 329 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 RBM18Q96H35 190 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 DIABLOQ9NR28 239 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 CD84Q9UIB8 345 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 TEX28O15482 410 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 C2orf27AQ580R0 203 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 CARD16Q5EG05 197 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 ADGRF1Q5T601 910 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 PEG10Q86TG7 708 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 FUKQ8N0W3 1084 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 OR10H5Q8NGA6 315 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 ZNF354BQ96LW1 612 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 SRMSQ9H3Y6 488 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 BBIP1A8MTZ0 92 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 USP46P62068 366 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 PPIDQ08752 370 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 VPS26BQ4G0F5 336 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 SAMD14Q8IZD0 417 aaPredicted RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 TFAP2BQ92481 460 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 REXO4Q9GZR2 422 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 SAMHD1Q9Y3Z3 626 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 TAS2R41P59536 307 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 SRSF11Q05519 484 aaKnown RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 FSTL1Q12841 308 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 TSTD2Q5T7W7 516 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 CIR1Q86X95 450 aaPredicted RBP16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 GMPPBQ9Y5P6 360 aa16.14■□□□□ 0.17
PCDHA3-201ENST00000522353 TRIM43BA6NCK2 446 aa16.13■□□□□ 0.17
PCDHA3-201ENST00000522353 NBNO60934 754 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms