RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 POLR2EP19388 210 aaKnown RBP18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 SPAM1P38567 509 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 IL2P60568 153 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 ERVK-21P61565 698 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 PFKFB4Q16877 469 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 DNAL1Q4LDG9 190 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 TMEM215Q68D42 235 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 GRAMD4Q6IC98 578 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 Q6ZVU0 165 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 KIRREL3Q8IZU9 778 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 ARHGAP24Q8N264 748 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 CELF5Q8N6W0 485 aaKnown RBP18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 ERVW-1Q9UQF0 538 aa18.33■□□□□ 0.53
TRAPPC9-210ENST00000521667 TRBV5-4A0A0C4DH59 114 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 GOLGA8CPA6NN73 597 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 SYCE1LA8MT33 242 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 TRIM24O15164 1050 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 UGT2B4P06133 528 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 GFAPP14136 432 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 RPS3P23396 243 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 PRDX6P30041 224 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 COPAP53621 1224 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 PTPN5P54829 565 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 MXRA7P84157 204 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 TSNQ15631 228 aaKnown RBP18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 LYPLAL1Q5VWZ2 237 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 RBFAQ8N0V3 343 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 MAGEC3Q8TD91 643 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 MAELQ96JY0 434 aaKnown RBP18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 MCCC1Q96RQ3 725 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 CLPBQ9H078 707 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 TNFRSF12AQ9NP84 129 aa18.33■□□□□ 0.52
TRAPPC9-210ENST00000521667 A0A1W2PQ67 120 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 CCDC189A1A4V9 331 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 NPEPPSL1A6NEC2 478 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 SUPT3HB4E1H0 165 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 WASH3PC4AMC7 463 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 CDC7O00311 574 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 BTN3A1O00481 513 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 UBFD1O14562 309 aaKnown RBP18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 SUPT3HO75486 399 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 PGM1P36871 562 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 CLCN7P51798 805 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 KLF10Q13118 480 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 NAA25Q14CX7 972 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 WASHC2DQ5SRD0 308 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 PLPP6Q8IY26 295 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 POU5F2Q8N7G0 328 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 C12orf76Q8N812 135 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 CHST14Q8NCH0 376 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 OR2A12Q8NGT7 310 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 FUBP1Q96AE4 644 aaKnown RBP18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 LINGO1Q96FE5 620 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 ASIC4Q96FT7 647 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 LRRC3BQ96PB8 259 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 ASB2Q96Q27 587 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 FIS1Q9Y3D6 152 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 IQCF5A8MTL0 148 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 SDHDO14521 159 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 ECI2O75521 394 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 ACRV1P26436 265 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 CA5AP35218 305 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 RECQLP46063 649 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 SATB1Q01826 763 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 DHCR24Q15392 516 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 CHRNA6Q15825 494 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 GEN1Q17RS7 908 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 GPR33Q49SQ1 333 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 LRRC66Q68CR7 880 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 NXNQ6DKJ4 435 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 PTRHD1Q6GMV3 140 aaKnown RBP18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 CPNE9Q8IYJ1 553 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 FBXO39Q8N4B4 442 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 EEF1AKMT1Q8WVE0 214 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 DENND2DQ9H6A0 471 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 SARS2Q9NP81 518 aaKnown RBP18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 DUS2Q9NX74 493 aaKnown RBP18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 CRLS1Q9UJA2 301 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 GNPTGQ9UJJ9 305 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 PLA2G4CQ9UP65 541 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 DHRS7Q9Y394 339 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 TRAF6Q9Y4K3 522 aa18.32■□□□□ 0.52
TRAPPC9-210ENST00000521667 MAGEC1O60732 1142 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 SKAP2O75563 359 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 SIX3O95343 332 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 CHRM1P11229 460 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 UGT1A6P19224 532 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 UGT1A1P22309 533 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 UGT1A4P22310 534 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 UGT1A3P35503 534 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 UGT1A5P35504 534 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 SEMG2Q02383 582 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 BTKQ06187 659 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 GDPD4Q6W3E5 623 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 CPSF7Q8N684 471 aaKnown RBP18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 AGAP11Q8TF27 550 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 MYLIPQ8WY64 445 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 MRGPRX3Q96LB0 322 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 BOCQ9BWV1 1114 aa18.31■□□□□ 0.52
TRAPPC9-210ENST00000521667 PBX4Q9BYU1 374 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms