RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 SHCBP1LQ9BZQ2 653 aa26.76■■□□□ 1.87
COL13A1-212ENST00000520133 SYCE1LA8MT33 242 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 SP100P23497 879 aaPredicted RBP26.75■■□□□ 1.87
COL13A1-212ENST00000520133 NFKBIAP25963 317 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 SLC9B1Q4ZJI4 515 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 TCEAL5Q5H9L2 206 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 FRMD7Q6ZUT3 714 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 MAPK15Q8TD08 544 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 SORCS1Q8WY21 1168 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 EXT2Q93063 718 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 TCF7L2Q9NQB0 619 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 KLC4Q9NSK0 619 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 GTSE1Q9NYZ3 720 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 GDE1Q9NZC3 331 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 TAGLN3Q9UI15 199 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 GNPTGQ9UJJ9 305 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 RNF112Q9ULX5 631 aa26.75■■□□□ 1.87
COL13A1-212ENST00000520133 TTC34A8MYJ7 566 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 CHRM1P11229 460 aaPredicted RBP26.74■■□□□ 1.87
COL13A1-212ENST00000520133 ACRV1P26436 265 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 HERVK_113P63132 956 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 CHRNA6Q15825 494 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 SH2D4BQ5SQS7 431 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 ZNF678Q5SXM1 525 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 PTRHD1Q6GMV3 140 aaKnown RBP26.74■■□□□ 1.87
COL13A1-212ENST00000520133 TREML1Q86YW5 311 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 MYLIPQ8WY64 445 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 PBXIP1Q96AQ6 731 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 FAR2Q96K12 515 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 BTBD10Q9BSF8 475 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 ERVK-6Q9BXR3 956 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 OBP2AQ9NY56 170 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 GALPQ9UBC7 116 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 STK38LQ9Y2H1 464 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 PIKFYVEQ9Y2I7 2098 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 GRID2O43424 1007 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 TULP3O75386 442 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 ENO1P06733 434 aaKnown RBP26.74■■□□□ 1.87
COL13A1-212ENST00000520133 HNRNPLP14866 589 aaKnown RBP eCLIP26.74■■□□□ 1.87
COL13A1-212ENST00000520133 AOC1P19801 751 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 ST8SIA6P61647 398 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 UBAP2LQ14157 1087 aaKnown RBP26.74■■□□□ 1.87
COL13A1-212ENST00000520133 ACAD11Q709F0 780 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 PTGR2Q8N8N7 351 aaPredicted RBP26.74■■□□□ 1.87
COL13A1-212ENST00000520133 KDM1BQ8NB78 822 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 TBC1D10AQ9BXI6 508 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 OSBPL1AQ9BXW6 950 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 SLC28A3Q9HAS3 691 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.74■■□□□ 1.87
COL13A1-212ENST00000520133 WASF2Q9Y6W5 498 aa26.74■■□□□ 1.87
COL13A1-212ENST00000520133 TRPC5OSA6NMA1 111 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 PRR5-ARHGAP8B1AHC4 643 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 SUPT7LO94864 414 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 CYP2A6P11509 494 aaPredicted RBP26.73■■□□□ 1.87
COL13A1-212ENST00000520133 GFAPP14136 432 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 NCF2P19878 526 aaPredicted RBP26.73■■□□□ 1.87
COL13A1-212ENST00000520133 ARHGAP8P85298 464 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 PTSQ03393 145 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 GET4Q7L5D6 327 aaPredicted RBP26.73■■□□□ 1.87
COL13A1-212ENST00000520133 GPR26Q8NDV2 337 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 LRIG1Q96JA1 1093 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 ASB2Q96Q27 587 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 SLC30A3Q99726 388 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 IGFLR1Q9H665 355 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 SARS2Q9NP81 518 aaKnown RBP26.73■■□□□ 1.87
COL13A1-212ENST00000520133 THG1LQ9NWX6 298 aaKnown RBP26.73■■□□□ 1.87
COL13A1-212ENST00000520133 B4GALT6Q9UBX8 382 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 DHRS7Q9Y394 339 aa26.73■■□□□ 1.87
COL13A1-212ENST00000520133 UBXN8O00124 270 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 TRANK1O15050 2925 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 MGRN1O60291 552 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 UGT1A6P19224 532 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 UGT1A1P22309 533 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 UGT1A4P22310 534 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 LHCGRP22888 699 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 UGT1A3P35503 534 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 UGT1A5P35504 534 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 CLCN7P51798 805 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 SEMG2Q02383 582 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 ARHGEF7Q14155 803 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 GPR149Q86SP6 731 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 LINGO1Q96FE5 620 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 PLEKHG4BQ96PX9 1271 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 NUF2Q9BZD4 464 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 GSTO2Q9H4Y5 243 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 IL36AQ9UHA7 158 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 CDYLQ9Y232 598 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 ANKRD12Q6UB98 2062 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 AGAP14A8MT82 685 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 HEPACAM2A8MVW5 462 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 SUPT3HB4E1H0 165 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 BTN3A1O00481 513 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 SUPT3HO75486 399 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 LEFTY1O75610 366 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 MTHFD2P13995 350 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 ARSAP15289 507 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 ZNF30P17039 623 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 TSNQ15631 228 aaKnown RBP26.72■■□□□ 1.87
COL13A1-212ENST00000520133 CUZD1Q86UP6 607 aa26.72■■□□□ 1.87
COL13A1-212ENST00000520133 C12orf40Q86WS4 652 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms