RNA–Protein interactions for RNA: ENST00000519470.1

MCM4-208, Transcript of minichromosome maintenance complex component 4, human

TSL 2

Gene MCM4, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCM4-208	ENST00000519470	ANKRD66	B4E2M5	251 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	GPR89A	B7ZAQ6	455 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	MMP2	P08253	660 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	FAM228B	P0C875	321 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	GPR89B	P0CG08	455 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	MX2	P20592	715 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	ANP32A	P39687	249 aa	Known RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	CCR10	P46092	362 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	UBE2I	P63279	158 aa	Known RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	ZBED6	P86452	979 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	MAP7	Q14244	749 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	QPCT	Q16769	361 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	ATP13A4	Q4VNC1	1196 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	ALKBH5	Q6P6C2	394 aa	Known RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	TIPARP	Q7Z3E1	657 aa	Known RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	PQLC3	Q8N755	202 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	LPCAT1	Q8NF37	534 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	NCSTN	Q92542	709 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	IQCD	Q96DY2	449 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	MLPH	Q9BV36	600 aa	Predicted RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	ZMYND15	Q9H091	742 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	FAM83D	Q9H4H8	585 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	SIDT1	Q9NXL6	827 aa	Known RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	KCNK6	Q9Y257	313 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	PRKAB1	Q9Y478	270 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	SPEN	Q96T58	3664 aa	Known RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	MAST4	O15021	2626 aa		11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.63	□□□□□ -0.55
MCM4-208	ENST00000519470	PRR19	A6NJB7	356 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470		A8MU76	341 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	CHUK	O15111	745 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	GRID2	O43424	1007 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	STK17B	O94768	372 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	PROSC	O94903	275 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	C9	P02748	559 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	KRT7	P08729	469 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	ACP5	P13686	325 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	DCDC1	P59894	354 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	GBE1	Q04446	702 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	CDC20	Q12834	499 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	SLC10A2	Q12908	348 aa	Predicted RBP	11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	NFATC2	Q13469	925 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	SNAP47	Q5SQN1	464 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	PDPK2P	Q6A1A2	396 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	CPNE8	Q86YQ8	564 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	PHYKPL	Q8IUZ5	450 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	MAP7D3	Q8IWC1	876 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	CCDC13	Q8IYE1	715 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	CCHCR1	Q8TD31	782 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	EID2B	Q96D98	161 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	APMAP	Q9HDC9	416 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	DTL	Q9NZJ0	730 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	ATXN10	Q9UBB4	475 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	CPNE7	Q9UBL6	633 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	LCMT1	Q9UIC8	334 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	ANAPC2	Q9UJX6	822 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	CAPN11	Q9UMQ6	739 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	TTLL3	Q9Y4R7	772 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	DOPEY2	Q9Y3R5	2298 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	NAV2	Q8IVL1	2488 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	RELN	P78509	3460 aa		11.62	□□□□□ -0.55
MCM4-208	ENST00000519470	ZNF487	B1APH4	448 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	POLR1C	O15160	346 aa	Predicted RBP	11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	TOX3	O15405	576 aa	Predicted RBP	11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	NKX2-8	O15522	239 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	SERPINC1	P01008	464 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	XRCC1	P18887	633 aa	Predicted RBP	11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	CASR	P41180	1078 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	CD86	P42081	329 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	STAT5A	P42229	794 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	TAS2R40	P59535	323 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	IFI35	P80217	286 aa	Predicted RBP	11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	MC1R	Q01726	317 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	PPID	Q08752	370 aa	Known RBP	11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	PLXDC1	Q8IUK5	500 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	ESX1	Q8N693	406 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	CNTD1	Q8N815	330 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	KCTD6	Q8NC69	237 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	PLEKHG4B	Q96PX9	1271 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	TRIB3	Q96RU7	358 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	CTRC	Q99895	268 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	ZSCAN5A	Q9BUG6	496 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	TBC1D10A	Q9BXI6	508 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	ADGRE3	Q9BY15	652 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	EPN3	Q9H201	632 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	OGFR	Q9NZT2	677 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	UVRAG	Q9P2Y5	699 aa		11.61	□□□□□ -0.55
MCM4-208	ENST00000519470	SNX2	O60749	519 aa		11.6	□□□□□ -0.55
MCM4-208	ENST00000519470	JCHAIN	P01591	159 aa		11.6	□□□□□ -0.55
MCM4-208	ENST00000519470	ZNF8	P17098	575 aa	Predicted RBP	11.6	□□□□□ -0.55
MCM4-208	ENST00000519470	KDELR1	P24390	212 aa		11.6	□□□□□ -0.55
MCM4-208	ENST00000519470	OAS2	P29728	719 aa	Known RBP	11.6	□□□□□ -0.55
MCM4-208	ENST00000519470	GJC1	P36383	396 aa		11.6	□□□□□ -0.55
MCM4-208	ENST00000519470	SSR1	P43307	286 aa	Known RBP	11.6	□□□□□ -0.55
MCM4-208	ENST00000519470	PPM1F	P49593	454 aa	Predicted RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms