RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 KIAA1024LP59773 190 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 EIF2B5Q13144 721 aaKnown RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 FRG1Q14331 258 aaKnown RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 FZD2Q14332 565 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 CCDC6Q16204 474 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 KYNUQ16719 465 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 ZNF789Q5FWF6 425 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 SPANXN3Q5MJ09 141 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 GPRC6AQ5T6X5 926 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 ZDHHC20Q5W0Z9 365 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 PDPK2PQ6A1A2 396 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 ZC3H14Q6PJT7 736 aaKnown RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 AFTPHQ6ULP2 937 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 XKR5Q6UX68 686 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 SNX20Q7Z614 316 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 PTAR1Q7Z6K3 402 aaPredicted RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 ADGRG6Q86SQ4 1221 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 SERPINA9Q86WD7 417 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 SPNS2Q8IVW8 549 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 NXPE1Q8N323 547 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 GPR161Q8N6U8 529 aaKnown RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
CLN8-202ENST00000517514 GPR150Q8NGU9 434 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 OR4L1Q8NH43 312 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 AENQ8WTP8 325 aaKnown RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 OR1E3Q8WZA6 343 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 ATOH1Q92858 354 aaPredicted RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 GLYATL1Q969I3 302 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 LOXL4Q96JB6 756 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 NAT9Q9BTE0 207 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 ZSCAN5AQ9BUG6 496 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 BOCQ9BWV1 1114 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 C1QTNF7Q9BXJ2 289 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 ARRDC1-AS1Q9H2J1 176 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 CDC42EP4Q9H3Q1 356 aaKnown RBP9.8□□□□□ -0.84
CLN8-202ENST00000517514 ASB8Q9H765 288 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 CAPN10Q9HC96 672 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 FGF22Q9HCT0 170 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 AASDHPPTQ9NRN7 309 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 SAMD15Q9P1V8 674 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 APPL1Q9UKG1 709 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 TMEM98Q9Y2Y6 226 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 ST14Q9Y5Y6 855 aa9.8□□□□□ -0.84
CLN8-202ENST00000517514 A0A1B0GTW7 788 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 PROB1E7EW31 1015 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 TLR4O00206 839 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 VILLO15195 856 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 CD3EAPO15446 510 aaKnown RBP9.79□□□□□ -0.84
CLN8-202ENST00000517514 DNAJC6O75061 913 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 TTC4O95801 387 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 S1PR4O95977 384 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 MYCLP1P12525 358 aaPredicted RBP9.79□□□□□ -0.84
CLN8-202ENST00000517514 ACRV1P26436 265 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 MPLP40238 635 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 CTSKP43235 329 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 CTSCP53634 463 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 NXPH1P58417 271 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 YPEL5P62699 121 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 CACNG1Q06432 222 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 STAT4Q14765 748 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 NFATC4Q14934 902 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 SHBQ15464 509 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 UAP1Q16222 522 aaPredicted RBP9.79□□□□□ -0.84
CLN8-202ENST00000517514 LONRF1Q17RB8 773 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 TYSND1Q2T9J0 566 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 GPR33Q49SQ1 333 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 ZRANB3Q5FWF4 1079 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 TEDDM1Q5T9Z0 273 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 LAIR1Q6GTX8 287 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 NEPROQ6NW34 567 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 CAPN12Q6ZSI9 719 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 IQCHQ86VS3 1027 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 CCNJLQ8IV13 435 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 ZNF547Q8IVP9 402 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 DENND6AQ8IWF6 608 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 CNTN4Q8IWV2 1026 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 DDHD1Q8NEL9 900 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 OR6P1Q8NGX9 317 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 GSDMBQ8TAX9 411 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 PYROXD1Q8WU10 500 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 CERS2Q96G23 380 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 KLHDC7BQ96G42 594 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 SCARF2Q96GP6 870 aaPredicted RBP9.79□□□□□ -0.84
CLN8-202ENST00000517514 HIC2Q96JB3 615 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 MCMBPQ9BTE3 642 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 FUT8Q9BYC5 575 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 TCEAL2Q9H3H9 227 aaPredicted RBP9.79□□□□□ -0.84
CLN8-202ENST00000517514 WDR26Q9H7D7 661 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 MRPL40Q9NQ50 206 aaKnown RBP9.79□□□□□ -0.84
CLN8-202ENST00000517514 CATSPERZQ9NTU4 200 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 C20orf96Q9NUD7 363 aaPredicted RBP9.79□□□□□ -0.84
CLN8-202ENST00000517514 ATXN10Q9UBB4 475 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 MTRF1LQ9UGC7 380 aaKnown RBP9.79□□□□□ -0.84
CLN8-202ENST00000517514 SLC17A4Q9Y2C5 497 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 PSAT1Q9Y617 370 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 PRSS21Q9Y6M0 314 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 DMXL1Q9Y485 3027 aa9.79□□□□□ -0.84
CLN8-202ENST00000517514 SPTY2D1-AS1A0A0U1RR47 76 aa9.78□□□□□ -0.84
CLN8-202ENST00000517514 TCRBV9S1A1TA0A576 114 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms