RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 TRAF2Q12933 501 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 TUBB3Q13509 450 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 RAPSNQ13702 412 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 LAMB3Q13751 1172 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 RFTN1Q14699 578 aaPredicted RBP10.36□□□□□ -0.75
CLDND1-231ENST00000515620 TMCO4Q5TGY1 634 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 CACHD1Q5VU97 1274 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 FAM92BQ6ZTR7 304 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 USP45Q70EL2 814 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 PRSS42Q7Z5A4 293 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 TECPR1Q7Z6L1 1165 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 AVL9Q8NBF6 648 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 SLC30A5Q8TAD4 765 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 SLC20A1Q8WUM9 679 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 COX14Q96I36 57 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 PSKH2Q96QS6 385 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 AGAP2Q99490 1192 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 GPATCH2LQ9NWQ4 482 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 GPR83Q9NYM4 423 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 ATP6V1DQ9Y5K8 247 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 SLC30A1Q9Y6M5 507 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 CSMD2Q7Z408 3487 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 HIVEP1P15822 2718 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 PDZD2O15018 2839 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 MTORP42345 2549 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 A0A1W2PQ67 120 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 TMEM63AO94886 807 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 MTIF2P46199 727 aaKnown RBP10.35□□□□□ -0.75
CLDND1-231ENST00000515620 CAPZBP47756 277 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 RENBPP51606 427 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 ZNF235Q14590 738 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 KCNAB1Q14722 419 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 LBRQ14739 615 aaKnown RBP10.35□□□□□ -0.75
CLDND1-231ENST00000515620 ZXDCQ2QGD7 858 aaPredicted RBP10.35□□□□□ -0.75
CLDND1-231ENST00000515620 KRTAP21-3Q3LHN1 58 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 PLEKHN1Q494U1 663 aaPredicted RBP10.35□□□□□ -0.75
CLDND1-231ENST00000515620 LRRC66Q68CR7 880 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 IRGCQ6NXR0 463 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 CYB5D1Q6P9G0 228 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 WDR59Q6PJI9 974 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 TMEM26Q6ZUK4 368 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 PHYKPLQ8IUZ5 450 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 ARHGAP12Q8IWW6 846 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 TRIM48Q8IWZ4 208 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 NPWQ8N729 165 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 EXD1Q8NHP7 514 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 RSC1A1Q92681 617 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 SCRN2Q96FV2 425 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 PLEKHG4BQ96PX9 1271 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 MCCC1Q96RQ3 725 aaPredicted RBP10.35□□□□□ -0.75
CLDND1-231ENST00000515620 SELENOOQ9BVL4 669 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 RIOK2Q9BVS4 552 aaKnown RBP10.35□□□□□ -0.75
CLDND1-231ENST00000515620 OSGEPL1Q9H4B0 414 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 UCK1Q9HA47 277 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 NOD2Q9HC29 1040 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 PDE7BQ9NP56 450 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 VPS18Q9P253 973 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 RARRES3Q9UL19 164 aa10.35□□□□□ -0.75
CLDND1-231ENST00000515620 SSU72P8A0A1W2PR75 194 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 OR5K4A6NMS3 321 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 PRSS44E7EML9 344 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 F5H423 210 aaPredicted RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 F8VZ95 297 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 EEF2KO00418 725 aaKnown RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 LRRTM2O43300 516 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 VIPP01282 170 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 PYGLP06737 847 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 NELFEP18615 380 aaKnown RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 LPOP22079 712 aaPredicted RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 HNRNPH3P31942 346 aaKnown RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 HTR7P34969 479 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 PER3P56645 1201 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 PDE1BQ01064 536 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 IL10RBQ08334 325 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 SLC10A7Q0GE19 358 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 SP5Q6BEB4 398 aaPredicted RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 DPY19L2P1Q6NXN4 242 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 ZNF765Q7L2R6 523 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 SIDT2Q8NBJ9 832 aaKnown RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 ADAMTS17Q8TE56 1095 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 KLHL6Q8WZ60 621 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 MR1Q95460 341 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 SMIM14Q96QK8 99 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 SMAD5Q99717 465 aaKnown RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 ILKAPQ9H0C8 392 aaPredicted RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 SCHIP1Q9P0W5 487 aaPredicted RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 NOCTQ9UK39 431 aaKnown RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 ITGB1BP2Q9UKP3 347 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 FARSAQ9Y285 508 aaKnown RBP10.34□□□□□ -0.75
CLDND1-231ENST00000515620 B3GNT3Q9Y2A9 372 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 CCDC168Q8NDH2 2452 aa10.34□□□□□ -0.75
CLDND1-231ENST00000515620 DAPK3O43293 454 aa10.33□□□□□ -0.76
CLDND1-231ENST00000515620 ZG16O60844 167 aa10.33□□□□□ -0.76
CLDND1-231ENST00000515620 PGLSO95336 258 aa10.33□□□□□ -0.76
CLDND1-231ENST00000515620 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
CLDND1-231ENST00000515620 FOLR1P15328 257 aa10.33□□□□□ -0.76
CLDND1-231ENST00000515620 ZNF143P52747 638 aaPredicted RBP10.33□□□□□ -0.76
CLDND1-231ENST00000515620 AIF1P55008 147 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms