RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PRR23BQ6ZRT6 265 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 CNTN4Q8IWV2 1026 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 DDHD1Q8NEL9 900 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 FUBP1Q96AE4 644 aaKnown RBP20.81■□□□□ 0.92
LSM6-207ENST00000515311 TCF12Q99081 682 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 TTC1Q99614 292 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 GPR27Q9NS67 375 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 IL1RAPL1Q9NZN1 696 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 MARCH4Q9P2E8 410 aaPredicted RBP20.81■□□□□ 0.92
LSM6-207ENST00000515311 SUSD2Q9UGT4 822 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 OR1A2Q9Y585 309 aa20.81■□□□□ 0.92
LSM6-207ENST00000515311 PRR5-ARHGAP8B1AHC4 643 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 GOLGA8KD6RF30 607 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 GOLGA8TH3BQL2 631 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 ERLIN1O75477 346 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 SLC25A14O95258 325 aaPredicted RBP20.8■□□□□ 0.92
LSM6-207ENST00000515311 ACSL3O95573 720 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 GNSP15586 552 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 ACRV1P26436 265 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 CD38P28907 300 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 PPARGP37231 505 aaPredicted RBP20.8■□□□□ 0.92
LSM6-207ENST00000515311 TTPAP49638 278 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 CDKN1CP49918 316 aaPredicted RBP20.8■□□□□ 0.92
LSM6-207ENST00000515311 AFF3P51826 1226 aaKnown RBP20.8■□□□□ 0.92
LSM6-207ENST00000515311 KIAA1024LP59773 190 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 TYSND1Q2T9J0 566 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 LDLRAP1Q5SW96 308 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 GPRC6AQ5T6X5 926 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 ZNF470Q6ECI4 717 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 MICALCLQ6ZW33 695 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 SDCCAG8Q86SQ7 713 aaPredicted RBP20.8■□□□□ 0.92
LSM6-207ENST00000515311 SERPINA9Q86WD7 417 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 DCP2Q8IU60 420 aaKnown RBP20.8■□□□□ 0.92
LSM6-207ENST00000515311 CILP2Q8IUL8 1156 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 SYT12Q8IV01 421 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 FAM96AQ9H5X1 160 aa20.8■□□□□ 0.92
LSM6-207ENST00000515311 PPANQ9NQ55 473 aaKnown RBP20.8■□□□□ 0.92
LSM6-207ENST00000515311 IGLV3-16A0A075B6K0 115 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 A0A1B0GTW7 788 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 A0A1W2PR77 199 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 CACNB4O00305 520 aaPredicted RBP20.79■□□□□ 0.92
LSM6-207ENST00000515311 INPP4BO15327 924 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 RIPK2O43353 540 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 PRSS56P0CW18 603 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 CA5AP35218 305 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 SEMA3AQ14563 771 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 ITIH4Q14624 930 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 NFATC4Q14934 902 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 RNF187Q5TA31 235 aaPredicted RBP20.79■□□□□ 0.92
LSM6-207ENST00000515311 KDM7AQ6ZMT4 941 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 Q6ZSR6 202 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 KIAA0408Q6ZU52 694 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 TAS2R42Q7RTR8 314 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 RABEPKQ7Z6M1 372 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 OTUD6BQ8N6M0 293 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 OR13H1Q8NG92 308 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 FBF1Q8TES7 1133 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 HEXDCQ8WVB3 486 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 CDKL2Q92772 493 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 KLHDC7BQ96G42 594 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 ZDHHC3Q9NYG2 299 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 ZFATQ9P243 1243 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 RAB23Q9ULC3 237 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 VPS9D1Q9Y2B5 631 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 GON4LQ3T8J9 2241 aa20.79■□□□□ 0.92
LSM6-207ENST00000515311 TP53BP1Q12888 1972 aaPredicted RBP20.78■□□□□ 0.92
LSM6-207ENST00000515311 A0A087WUV0 522 aaPredicted RBP20.78■□□□□ 0.92
LSM6-207ENST00000515311 FAM159BA6NKW6 160 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 VILLO15195 856 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 PFDN6O15212 129 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 MAGEC1O60732 1142 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 C1QAP02745 245 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 KELP23276 732 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 PMLP29590 882 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 NAB1Q13506 487 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 TEAD4Q15561 434 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 SMAD1Q15797 465 aaKnown RBP20.78■□□□□ 0.92
LSM6-207ENST00000515311 DBN1Q16643 649 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 UBAP2Q5T6F2 1119 aaKnown RBP20.78■□□□□ 0.92
LSM6-207ENST00000515311 TEDDM1Q5T9Z0 273 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 GALNT7Q86SF2 657 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 MREGQ8N565 214 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 SKA1Q96BD8 255 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 COPS8Q99627 209 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 LGR4Q9BXB1 951 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 ZCCHC2Q9C0B9 1178 aaKnown RBP20.78■□□□□ 0.92
LSM6-207ENST00000515311 EPB41L4BQ9H329 900 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 ACSS3Q9H6R3 686 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 TRIM39Q9HCM9 518 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 IARS2Q9NSE4 1012 aaKnown RBP20.78■□□□□ 0.92
LSM6-207ENST00000515311 INTS10Q9NVR2 710 aaKnown RBP20.78■□□□□ 0.92
LSM6-207ENST00000515311 NSMCE4AQ9NXX6 385 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 VPS18Q9P253 973 aa20.78■□□□□ 0.92
LSM6-207ENST00000515311 GPR89AB7ZAQ6 455 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 VEGFDO43915 354 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 EPN2O95208 641 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 GPR89BP0CG08 455 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 THEGLP0DJG4 465 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 HTR1BP28222 390 aa20.77■□□□□ 0.92
LSM6-207ENST00000515311 SLC1A2P43004 574 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms