RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RAPGEFL1Q9UHV5 662 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 BTRCQ9Y297 605 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 CEPT1Q9Y6K0 416 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 A0A1W2PQ72 361 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 PCP4L1A6NKN8 68 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 KCNU1A8MYU2 1149 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 TCF4P15884 667 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 SMU1Q2TAY7 513 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 KLHL17Q6TDP4 642 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 NEK10Q6ZWH5 1172 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 SLC22A16Q86VW1 577 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 SLC7A5P1Q8MH63 180 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 ZNF781Q8N8C0 355 aa13.08□□□□□ -0.32
TCOF1-213ENST00000514442 FAM149AA5PLN7 773 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 CCL22O00626 93 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 SEMA3DO95025 777 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 UGT2B4P06133 528 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 WARSP23381 471 aaKnown RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 CREMQ03060 361 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 GDF6Q6KF10 455 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 GATAD2AQ86YP4 633 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 SPPL2CQ8IUH8 684 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 ASB9Q96DX5 294 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 ZNF395Q9H8N7 513 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 CHRAC1Q9NRG0 131 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 EGFL7Q9UHF1 273 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 FOXD2O60548 495 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 IL1BP01584 269 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 MC4RP32245 332 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 PTPN9P43378 593 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 CNSTQ6PJW8 725 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 SLC2A7Q6PXP3 512 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 DCDC5Q6ZRR9 648 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 SAPCD2Q86UD0 394 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 KRT73Q86Y46 540 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 QKIQ96PU8 341 aaKnown RBP eCLIP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 MAGEE1Q9HCI5 957 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 TRPC4Q9UBN4 977 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 C3orf18Q9UK00 162 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 BTN3A3O00478 584 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 SLC9A3R1O14745 358 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 C4BPBP20851 252 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 LPOP22079 712 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 ATP5F1P24539 256 aaPredicted RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 ACLYP53396 1101 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 DAOAP59103 153 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 ALDH6A1Q02252 535 aaKnown RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 GPR158Q5T848 1215 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 RAET1GQ6H3X3 334 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 LTBP3Q9NS15 1303 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 CD3EAPO15446 510 aaKnown RBP13.07□□□□□ -0.32
TCOF1-213ENST00000514442 NRP2O60462 931 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 C1RP00736 705 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 DSC2Q02487 901 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 TNFAIP8L3Q5GJ75 292 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 RAB43Q86YS6 212 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 OR4L1Q8NH43 312 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 NXNL1Q96CM4 212 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 IMPAD1Q9NX62 359 aa13.07□□□□□ -0.32
TCOF1-213ENST00000514442 VILLO15195 856 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 PIGRP01833 764 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 TACR2P21452 398 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 FUT4P22083 530 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 GPD2P43304 727 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 TTPAP49638 278 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 DNASE1L3Q13609 305 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 C1QTNF12Q5T7M4 302 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 REP15Q6BDI9 236 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 NPAS4Q8IUM7 802 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 FAM9CQ8IZT9 166 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 PARP8Q8N3A8 854 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 NKAPQ8N5F7 415 aaKnown RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 HOPXQ9BPY8 73 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 FBXO10Q9UK96 956 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 FBXO9Q9UK97 447 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 LOC100506127A0A0U1RQW1 187 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 HOXB8P17481 243 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 LAG3P18627 525 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 POU1F1P28069 291 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 TRIQKQ629K1 86 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 LDB1Q86U70 411 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ZNF567Q8N184 647 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 GDAP2Q9NXN4 497 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 LIMD1Q9UGP4 676 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ATP6AP2A0A1C7CYW4 349 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ATP6AP2O75787 350 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 BCAS2O75934 225 aaPredicted RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ATG7O95352 703 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 CCDC142Q17RM4 750 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 SLC9B1Q4ZJI4 515 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 NECAB2Q7Z6G3 386 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 ZC3H3Q8IXZ2 948 aaKnown RBP13.06□□□□□ -0.32
TCOF1-213ENST00000514442 NAT8LQ8N9F0 302 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 PCDH19Q8TAB3 1148 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 CXorf40AQ8TE69 158 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 MYOCQ99972 504 aa13.06□□□□□ -0.32
TCOF1-213ENST00000514442 MTRRQ9UBK8 725 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms