RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ANKRD66B4E2M5 251 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 AGRPO00253 132 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 POLR1CO15160 346 aaPredicted RBP12.44□□□□□ -0.42
VEGFA-216ENST00000512683 NUAK1O60285 661 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 MAP3K6O95382 1288 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 KRT7P08729 469 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 F3P13726 295 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 XRCC1P18887 633 aaPredicted RBP12.44□□□□□ -0.42
VEGFA-216ENST00000512683 CASRP41180 1078 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 TAS2R40P59535 323 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 SEPT6Q14141 434 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 DPYSL3Q14195 570 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 SLC18A3Q16572 532 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 HENMT1Q5T8I9 393 aaKnown RBP12.44□□□□□ -0.42
VEGFA-216ENST00000512683 ANKS6Q68DC2 871 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 CYB5D1Q6P9G0 228 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 RFLNAQ6ZTI6 216 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 MARK2Q7KZI7 788 aaKnown RBP12.44□□□□□ -0.42
VEGFA-216ENST00000512683 CHST15Q7LFX5 561 aaPredicted RBP12.44□□□□□ -0.42
VEGFA-216ENST00000512683 RBM12BQ8IXT5 1001 aaKnown RBP12.44□□□□□ -0.42
VEGFA-216ENST00000512683 ESX1Q8N693 406 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 KCTD6Q8NC69 237 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 OR8K1Q8NGG5 319 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 JPH3Q8WXH2 748 aaPredicted RBP12.44□□□□□ -0.42
VEGFA-216ENST00000512683 NCSTNQ92542 709 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 TRIM39Q9HCM9 518 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 CPNE7Q9UBL6 633 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 TBC1D29Q9UFV1 150 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 CD84Q9UIB8 345 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 CHKBQ9Y259 395 aa12.44□□□□□ -0.42
VEGFA-216ENST00000512683 ZNF487B1APH4 448 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 GRID2O43424 1007 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 MFSD11O43934 449 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 KCNJ13O60928 360 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 PROSCO94903 275 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 CLDN7O95471 211 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 TPM3P06753 285 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 MPSTP25325 297 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 TLE1Q04724 770 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 IHHQ14623 411 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 IL11RAQ14626 422 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 VSIG1Q86XK7 387 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 PHYKPLQ8IUZ5 450 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 FAF2Q96CS3 445 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 WDR24Q96S15 920 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 AGAP2Q99490 1192 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 CHP1Q99653 195 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 ZMYND15Q9H091 742 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 TMEM9Q9P0T7 183 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 CTTNBP2NLQ9P2B4 639 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 UVRAGQ9P2Y5 699 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 NFKBIL1Q9UBC1 381 aaPredicted RBP12.43□□□□□ -0.42
VEGFA-216ENST00000512683 KCTD3Q9Y597 815 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 PCDHB3Q9Y5E6 796 aa12.43□□□□□ -0.42
VEGFA-216ENST00000512683 TRBV23OR9-2A0A075B6M9 112 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 C1orf232A0A0U1RR37 186 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 SSU72P8A0A1W2PR75 194 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 PYCARD-AS1I3L0S3 204 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 INPP4BO15327 924 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 STK17BO94768 372 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 C9P02748 559 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 NTRK1P04629 796 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 H2AFZP0C0S5 128 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 SSR1P43307 286 aaKnown RBP12.42□□□□□ -0.42
VEGFA-216ENST00000512683 PPM1FP49593 454 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-216ENST00000512683 DCDC1P59894 354 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 NFKB2Q00653 900 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 DSC2Q02487 901 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 NFATC2Q13469 925 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 TRIM14Q14142 442 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 PTPRRQ15256 657 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 SLC14A2Q15849 920 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 QPCTQ16769 361 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 COLEC12Q5KU26 742 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 NCBP2-AS2Q69YL0 99 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 WASH2PQ6VEQ5 465 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 H2AFVQ71UI9 128 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 KDELC2Q7Z4H8 507 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 VSTM4Q8IW00 320 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 C9orf43Q8TAL5 461 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-216ENST00000512683 DTX3LQ8TDB6 740 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-216ENST00000512683 PMEPA1Q969W9 287 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 HDAC11Q96DB2 347 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 FCRL4Q96PJ5 515 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 ZSCAN5AQ9BUG6 496 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 TRIM4Q9C037 500 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 BRD8Q9H0E9 1235 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 ZFYVE1Q9HBF4 777 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 MAGEE1Q9HCI5 957 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 WASH6PQ9NQA3 447 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 KCND3Q9UK17 655 aa12.42□□□□□ -0.42
VEGFA-216ENST00000512683 UBR5O95071 2799 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-216ENST00000512683 MN1Q10571 1320 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-216ENST00000512683 LOC101059948A0A1B0GTJ6 334 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 GOLGA6L3A6NEY3 463 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 CHUKO15111 745 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 KMOO15229 486 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 NKX2-8O15522 239 aa12.41□□□□□ -0.42
VEGFA-216ENST00000512683 CBFA2T2O43439 604 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms