RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 PDX1P52945 283 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 OGDHQ02218 1023 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 KLHL30Q0D2K2 578 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 ILF3Q12906 894 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP46-208ENST00000512656 RALGDSQ12967 914 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 CLPPQ16740 277 aaPredicted RBP7.18□□□□□ -1.26
USP46-208ENST00000512656 CA9Q16790 459 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 C14orf28Q4W4Y0 310 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 RALGPS1Q5JS13 557 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 CCDC183Q5T5S1 534 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 PNCKQ6P2M8 343 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 PCSK4Q6UW60 755 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 TMCO3Q6UWJ1 677 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 SEZ6L2Q6UXD5 910 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 ZSWIM9Q86XI8 627 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 LRRC49Q8IUZ0 686 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 ARHGAP12Q8IWW6 846 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 NDUFAF2Q8N183 169 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 AOPEPQ8N6M6 819 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 Q8N9G6 341 aaPredicted RBP7.18□□□□□ -1.26
USP46-208ENST00000512656 PLA2G15Q8NCC3 412 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 NUS1Q96E22 293 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 PDXPQ96GD0 296 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 CMKLR1Q99788 373 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 SYT11Q9BT88 431 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 GSDMCQ9BYG8 508 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 FOXP3Q9BZS1 431 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 DPEP2Q9H4A9 486 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 FGF22Q9HCT0 170 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 HAUS2Q9NVX0 235 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 TAS2R14Q9NYV8 317 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 LRIT1Q9P2V4 623 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 B4GALT6Q9UBX8 382 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 CNOT8Q9UFF9 292 aaKnown RBP7.18□□□□□ -1.26
USP46-208ENST00000512656 PISDQ9UG56 409 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 ACSL6Q9UKU0 697 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 LOXL2Q9Y4K0 774 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 NAV2Q8IVL1 2488 aa7.18□□□□□ -1.26
USP46-208ENST00000512656 UBR5O95071 2799 aaPredicted RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 LRRK2Q5S007 2527 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 A0A1W2PQC6 194 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PRSS38A1L453 326 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PMS2P1A4D2B8 440 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 LRRC53A6NM62 1247 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 RHPN2P1A8MT19 583 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 B4DGG1 531 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 B8ZZF3 427 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PSMD11O00231 422 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 TRAFD1O14545 582 aaPredicted RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 HTRA2O43464 458 aaPredicted RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 NOBOXO60393 691 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 LRCH4O75427 683 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 CPNE6O95741 557 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 CPP00450 1065 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 LIPCP11150 499 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 CCNB1P14635 433 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 RAB6AP20340 208 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 CD82P27701 267 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 TEAD1P28347 426 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 VIPR1P32241 457 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PRKCIP41743 596 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 ZFP36L1Q07352 338 aaKnown RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 SLC10A7Q0GE19 358 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 DPYSQ14117 519 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 LY6DQ14210 128 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PIGHQ14442 188 aaPredicted RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 HLTFQ14527 1009 aaKnown RBP eCLIP7.17□□□□□ -1.26
USP46-208ENST00000512656 NCAPHQ15003 741 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 DPYSL2Q16555 572 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 MAP9Q49MG5 647 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PHF19Q5T6S3 580 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 SPECC1LQ69YQ0 1117 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 USP53Q70EK8 1073 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 USP45Q70EL2 814 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 APTXQ7Z2E3 356 aaKnown RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 SPRED1Q7Z699 444 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 B3GNT8Q7Z7M8 397 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PIM3Q86V86 326 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 SHISA5Q8N114 240 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 ATPAF2Q8N5M1 289 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 ARFGAP1Q8N6T3 406 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 NPWQ8N729 165 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PDCD6IPQ8WUM4 868 aaKnown RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 ZNF653Q96CK0 615 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 SGF29Q96ES7 293 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 COQ10AQ96MF6 247 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 NUDCD1Q96RS6 583 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PEBP4Q96S96 227 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 DPYSL5Q9BPU6 564 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 BPIFA3Q9BQP9 254 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.17□□□□□ -1.26
USP46-208ENST00000512656 B3GNT4Q9C0J1 378 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 TMEM168Q9H0V1 697 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 HAUS4Q9H6D7 363 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 CARS2Q9HA77 564 aaKnown RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 TRNAU1APQ9NX07 287 aaKnown RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 AIPL1Q9NZN9 384 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 CWC15Q9P013 229 aaKnown RBP7.17□□□□□ -1.26
USP46-208ENST00000512656 MYO1AQ9UBC5 1043 aa7.17□□□□□ -1.26
USP46-208ENST00000512656 PHTF1Q9UMS5 762 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms