RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 LPIN1Q14693 890 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 GPAT3Q53EU6 434 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 GCNT6Q5T4J0 391 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 FAM171A1Q5VUB5 890 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 PMS2CLQ68D20 193 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 PODNL1Q6PEZ8 512 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 SLC23A3Q6PIS1 610 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 TPRA1Q86W33 373 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 GAS2L3Q86XJ1 694 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 PLXDC1Q8IUK5 500 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 GUF1Q8N442 669 aaKnown RBP6.22□□□□□ -1.41
CHD1-208ENST00000512392 TP53I13Q8NBR0 393 aaPredicted RBP6.22□□□□□ -1.41
CHD1-208ENST00000512392 RDM1Q8NG50 284 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 SLC26A7Q8TE54 656 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 CNOT9Q92600 299 aaKnown RBP6.22□□□□□ -1.41
CHD1-208ENST00000512392 REXO5Q96IC2 774 aaKnown RBP6.22□□□□□ -1.41
CHD1-208ENST00000512392 PHACTR3Q96KR7 559 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 HAPLN2Q9GZV7 340 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 CARS2Q9HA77 564 aaKnown RBP6.22□□□□□ -1.41
CHD1-208ENST00000512392 EPB41L5Q9HCM4 733 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 SLC39A2Q9NP94 309 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 PNPLA3Q9NST1 481 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 C20orf141Q9NUB4 165 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 ERVK13-1Q9NX77 482 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 KCMF1Q9P0J7 381 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 VPS18Q9P253 973 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 KCNN3Q9UGI6 736 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 SLC23A1Q9UHI7 598 aa6.22□□□□□ -1.41
CHD1-208ENST00000512392 LOC100509620A0A075B734 347 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 C5orf52A6NGY3 159 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 SLC15A5A6NIM6 579 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 OR6C65A6NJZ3 312 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 CYR61O00622 381 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 PRRG1O14668 218 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 NRP1O14786 923 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 CHADO15335 359 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 TLX2O43763 284 aaPredicted RBP6.21□□□□□ -1.42
CHD1-208ENST00000512392 APEHP13798 732 aaKnown RBP6.21□□□□□ -1.42
CHD1-208ENST00000512392 ATF2P15336 505 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 LBPP18428 481 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 NR1D1P20393 614 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 THBS4P35443 961 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 MVDP53602 400 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 CDH13P55290 713 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 RBPJQ06330 500 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 DMPKQ09013 629 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 PDE7AQ13946 482 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 GSTA3Q16772 222 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 TMEM198Q66K66 360 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 C18orf63Q68DL7 685 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 KDM7AQ6ZMT4 941 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 LRRC70Q7Z2Q7 622 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 ABI3BPQ7Z7G0 1075 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 NRROSQ86YC3 692 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 DNERQ8NFT8 737 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 HEXDCQ8WVB3 486 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 CDKL2Q92772 493 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 EDAQ92838 391 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 SGK3Q96BR1 496 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 ZBTB45Q96K62 511 aaPredicted RBP6.21□□□□□ -1.42
CHD1-208ENST00000512392 C7orf34Q96L11 122 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 LMF1Q96S06 567 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 SSX3Q99909 188 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 ABHD6Q9BV23 337 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 SF3B5Q9BWJ5 86 aaKnown RBP6.21□□□□□ -1.42
CHD1-208ENST00000512392 FRMD8P1Q9BZ68 369 aaPredicted RBP6.21□□□□□ -1.42
CHD1-208ENST00000512392 PDZD7Q9H5P4 517 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.21□□□□□ -1.422e-10■■■■■ 42.7
CHD1-208ENST00000512392 DNAI1Q9UI46 699 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 NFU1Q9UMS0 254 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 USP22Q9UPT9 525 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 GAB2Q9UQC2 676 aa6.21□□□□□ -1.42
CHD1-208ENST00000512392 TCRBV7S2A1N4TA0A589 114 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 ANKRD61A6NGH8 418 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 CGB1A6NKQ9 187 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 HDAC3O15379 428 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 AKAP8O43823 692 aaKnown RBP6.2□□□□□ -1.42
CHD1-208ENST00000512392 TSPAN1O60635 241 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 B4GALT2O60909 372 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 RAD17O75943 681 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 SRPRAP08240 638 aaKnown RBP6.2□□□□□ -1.42
CHD1-208ENST00000512392 EBLN1P0CF75 366 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 ARSAP15289 507 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 RPL9P32969 192 aaKnown RBP6.2□□□□□ -1.42
CHD1-208ENST00000512392 PCGF2P35227 344 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 PTPN9P43378 593 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 PCBP3P57721 371 aaKnown RBP6.2□□□□□ -1.42
CHD1-208ENST00000512392 MXRA7P84157 204 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 EGR3Q06889 387 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 NFATC3Q12968 1075 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 PABPC1LQ4VXU2 614 aaKnown RBP6.2□□□□□ -1.42
CHD1-208ENST00000512392 TMEM196Q5HYL7 178 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 SLFN13Q68D06 897 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 RNF111Q6ZNA4 994 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 EFL1Q7Z2Z2 1120 aaKnown RBP6.2□□□□□ -1.42
CHD1-208ENST00000512392 PRSS42Q7Z5A4 293 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 PRRT2Q7Z6L0 340 aaPredicted RBP6.2□□□□□ -1.42
CHD1-208ENST00000512392 BIVMQ86UB2 503 aa6.2□□□□□ -1.42
CHD1-208ENST00000512392 CDR2LQ86X02 465 aaPredicted RBP6.2□□□□□ -1.42
CHD1-208ENST00000512392 PALM2Q8IXS6 379 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms