RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CSMD2Q7Z408 3487 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 CROCCQ5TZA2 2017 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 PCSK5Q92824 1860 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 A0A1W2PQ67 120 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 KRT38O76015 456 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 RECKO95980 971 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 FGF5P12034 268 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 CASP14P31944 242 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 GARSP41250 739 aaKnown RBP18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 NOP2P46087 812 aaKnown RBP18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 CCL11P51671 97 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 DPYSQ14117 519 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 ZNF235Q14590 738 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 PAPD7Q5XG87 772 aaKnown RBP18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 FAM199XQ6PEV8 388 aaPredicted RBP18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 ZNF765Q7L2R6 523 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 LZTR1Q8N653 840 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 C19orf60Q96EN9 201 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 HERPUD2Q9BSE4 406 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 MFRPQ9BY79 579 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 BRD8Q9H0E9 1235 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 ZNF768Q9H5H4 540 aaKnown RBP18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 SAMSN1Q9NSI8 373 aaKnown RBP18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 DONSONQ9NYP3 566 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 CWC15Q9P013 229 aaKnown RBP18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 PCSK1NQ9UHG2 260 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 PADI1Q9ULC6 663 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 PCDHGA9Q9Y5G4 932 aaKnown RBP18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 ITPR3Q14573 2671 aa18.78■□□□□ 0.6
HMGCS1-206ENST00000511774 KIR2DS5A0A0G2JLQ3 304 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 A0A0G2JNG1 304 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 FADS2P1A8MWK0 482 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 KIR2DS3K7RE56 304 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 FZD6O60353 706 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 STC1P52823 247 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 IL11RAQ14626 422 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 KIR2DS5Q14953 304 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 UGT8Q16880 541 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 JMJD6Q6NYC1 403 aaPredicted RBP18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 USP45Q70EL2 814 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 NLRP8Q86W28 1048 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 EXD1Q8NHP7 514 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 RSC1A1Q92681 617 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 ZNF599Q96NL3 588 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 EPB41L1Q9H4G0 881 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 STN1Q9H668 368 aaKnown RBP18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 VPS18Q9P253 973 aa18.77■□□□□ 0.6
HMGCS1-206ENST00000511774 ZFHX3Q15911 3703 aa18.77■□□□□ 0.59
HMGCS1-206ENST00000511774 AKAP9Q99996 3911 aa18.77■□□□□ 0.59
HMGCS1-206ENST00000511774 ARGFXA6NJG6 315 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 DAPK3O43293 454 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 KRT86O43790 486 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 MAFKO60675 156 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 PPP6R3Q5H9R7 873 aaPredicted RBP18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 ERMARDQ5T6L9 678 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 ARMC12Q5T9G4 340 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 MLKLQ8NB16 471 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 TRIM7Q9C029 511 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 FAM207AQ9NSI2 230 aaPredicted RBP18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 TAB2Q9NYJ8 693 aa18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 ZNF624Q9P2J8 865 aaPredicted RBP18.76■□□□□ 0.59
HMGCS1-206ENST00000511774 MDC1Q14676 2089 aaKnown RBP18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 UBXN7O94888 489 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 SLC19A1P41440 591 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 PPP1CAP62136 330 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 DPCR1Q3MIW9 517 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 ZNF648Q5T619 568 aaPredicted RBP18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 PWWP2BQ6NUJ5 590 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 TMEM26Q6ZUK4 368 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 RBMXL3Q8N7X1 1067 aaKnown RBP18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 KLHL6Q8WZ60 621 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 ING2Q9H160 280 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 ARFGAP3Q9NP61 516 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 TAS2R14Q9NYV8 317 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 SLC23A2Q9UGH3 650 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 ADGRG1Q9Y653 693 aa18.75■□□□□ 0.59
HMGCS1-206ENST00000511774 A0A0J9YYE9 177 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 C21orf140B9A014 251 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 CEACAM4O75871 244 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 RASSF9O75901 435 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 TRBC1P01850 177 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 CCNYL3P0C7X3 344 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 PRF1P14222 555 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 NFKBIAP25963 317 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 HSPA9P38646 679 aaKnown RBP18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 PTGIRP43119 386 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 KCNAB1Q14722 419 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 SLC6A19Q695T7 634 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 DCUN1D2Q6PH85 259 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 CERS6Q6ZMG9 384 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 PRSS42Q7Z5A4 293 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 MCOLN2Q8IZK6 566 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 UCK1Q9HA47 277 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 DTLQ9NZJ0 730 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 SIK3Q9Y2K2 1263 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 HIVEP1P15822 2718 aa18.74■□□□□ 0.59
HMGCS1-206ENST00000511774 ANKRD62A6NC57 917 aa18.73■□□□□ 0.59
HMGCS1-206ENST00000511774 TOX3O15405 576 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms