RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 GTF3C2Q8WUA4 911 aaPredicted RBP14.8□□□□□ -0.04
USP38-202ENST00000510377 GLT1D1Q96MS3 346 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 ZBED2Q9BTP6 218 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 ADAMTS5Q9UNA0 930 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 TBX18O95935 607 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 PRKACGP22612 351 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 CPT1AP50416 773 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 ATN1P54259 1190 aaPredicted RBP14.8□□□□□ -0.04
USP38-202ENST00000510377 DGUOKQ16854 277 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 C16orf59Q7L2K0 433 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 TMEM126BQ8IUX1 230 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 UTP15Q8TED0 518 aaKnown RBP14.8□□□□□ -0.04
USP38-202ENST00000510377 TAMM41Q96BW9 452 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 KATNAL1Q9BW62 490 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 SMURF2Q9HAU4 748 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 MARCH4Q9P2E8 410 aaPredicted RBP14.8□□□□□ -0.04
USP38-202ENST00000510377 ST14Q9Y5Y6 855 aa14.8□□□□□ -0.04
USP38-202ENST00000510377 MEIS3P2A8K0S8 358 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 GSRP00390 522 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 POU1F1P28069 291 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 TUBA4AP68366 448 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 LRRC74AQ0VAA2 488 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 DUSP28Q4G0W2 176 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 PAGE2Q7Z2X7 111 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 ZNF540Q8NDQ6 660 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 DACT3Q96B18 629 aaPredicted RBP14.79□□□□□ -0.04
USP38-202ENST00000510377 FEM1AQ9BSK4 669 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 NAA50Q9GZZ1 169 aaKnown RBP14.79□□□□□ -0.04
USP38-202ENST00000510377 ATP13A1Q9HD20 1204 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 SLC27A5Q9Y2P5 690 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 CDC7O00311 574 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 FADS2O95864 444 aaKnown RBP14.79□□□□□ -0.04
USP38-202ENST00000510377 C1QAP02745 245 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 OXTRP30559 389 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 DMPKQ09013 629 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 CPSF6Q16630 551 aaKnown RBP eCLIP14.79□□□□□ -0.04
USP38-202ENST00000510377 PPP4R4Q6NUP7 873 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 TMEM102Q8N9M5 508 aaPredicted RBP14.79□□□□□ -0.04
USP38-202ENST00000510377 CAPSLQ8WWF8 208 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 TMBIM1Q969X1 311 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 BBS2Q9BXC9 721 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 SMPD4Q9NXE4 827 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 C3orf18Q9UK00 162 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 ITGBL1O95965 494 aaPredicted RBP14.79□□□□□ -0.04
USP38-202ENST00000510377 MSH3P20585 1137 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 HOXA11P31270 313 aaPredicted RBP14.79□□□□□ -0.04
USP38-202ENST00000510377 ST13P50502 369 aaKnown RBP14.79□□□□□ -0.04
USP38-202ENST00000510377 ARSDP51689 593 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 LAPTM4AQ15012 233 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 CTXN3Q4LDR2 81 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 TIGD5Q53EQ6 642 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 ANKRD46Q86W74 232 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 ADHFE1Q8IWW8 467 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 C2CD4AQ8NCU7 369 aaPredicted RBP14.79□□□□□ -0.04
USP38-202ENST00000510377 BIRC7Q96CA5 298 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 NFKBIZQ9BYH8 718 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 ACTR3BQ9P1U1 418 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 NRAPQ86VF7 1730 aa14.79□□□□□ -0.04
USP38-202ENST00000510377 K7EPI3 171 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 PIRO00625 290 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 MLYCDO95822 493 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 ZNF26P17031 533 aaPredicted RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 IST1P53990 364 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CYP4F2P78329 520 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CYP4F3Q08477 520 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 FAM117BQ6P1L5 589 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 ATG14Q6ZNE5 492 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CPNE9Q8IYJ1 553 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 POC5Q8NA72 575 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 TRIM54Q9BYV2 358 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 REXO4Q9GZR2 422 aaKnown RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 TBC1D30Q9Y2I9 924 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 CDK14O94921 469 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 KRT75O95678 551 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CAPN1P07384 714 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 HIST1H2AGP0C0S8 130 aaPredicted RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 HIST1H2ADP20671 130 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CAPN3P20807 821 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 AGTR2P50052 363 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 ZNF177Q13360 481 aaPredicted RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 MEP1AQ16819 746 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 PKDCCQ504Y2 493 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 ZNF678Q5SXM1 525 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 C14orf80Q86SX3 495 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CHERPQ8IWX8 916 aaKnown RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 PTCD2Q8WV60 388 aaKnown RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 TOP1MTQ969P6 601 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 SLC47A1Q96FL8 570 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 HIST1H2AHQ96KK5 128 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 C3orf30Q96M34 536 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 HIST1H2AJQ99878 128 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 H2AFJQ9BTM1 129 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 EPB41L1Q9H4G0 881 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 ELOVL6Q9H5J4 265 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 CCM2LQ9NUG4 571 aaPredicted RBP14.78□□□□□ -0.04
USP38-202ENST00000510377 SH3PXD2BA1X283 911 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 FBP2O00757 339 aa14.78□□□□□ -0.04
USP38-202ENST00000510377 NTRK1P04629 796 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms