RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CDCP2Q5VXM1 449 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 CRTC3Q6UUV7 619 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 CHST15Q7LFX5 561 aaPredicted RBP13.43□□□□□ -0.26
SNF8-206ENST00000509989 ZNF547Q8IVP9 402 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 NAGSQ8N159 534 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 OR52K1Q8NGK4 314 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 MDM1Q8TC05 714 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 GLYATL1Q969I3 302 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 OR2M4Q96R27 311 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 CCDC3Q9BQI4 270 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 AP1M1Q9BXS5 423 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 DPEP2Q9H4A9 486 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 FAM96AQ9H5X1 160 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 NFKBIL1Q9UBC1 381 aaPredicted RBP13.43□□□□□ -0.26
SNF8-206ENST00000509989 KCNK6Q9Y257 313 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 RNF215Q9Y6U7 377 aa13.43□□□□□ -0.26
SNF8-206ENST00000509989 EPG5Q9HCE0 2579 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 A0A1W2PQM1 296 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 TRABD2BA6NFA1 517 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 AGRPO00253 132 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 PDE2AO00408 941 aaPredicted RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 NUAK1O60285 661 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 SLC25A14O95258 325 aaPredicted RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 ECEL1O95672 775 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 MT-CO3P00414 261 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 ACP5P13686 325 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 ACTR1BP42025 376 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 ZNF140P52738 457 aaPredicted RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 PDX1P52945 283 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 CTSCP53634 463 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 ACTR1AP61163 376 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 CCL7P80098 99 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 XIAPP98170 497 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 PEX6Q13608 980 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 HLTFQ14527 1009 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNF8-206ENST00000509989 PRPSAP1Q14558 356 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 GSE1Q14687 1217 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 TRIP13Q15645 432 aaPredicted RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 CCNG2Q16589 344 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 CCDC38Q502W7 563 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 HS1BP3Q53T59 392 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 CERCAMQ5T4B2 595 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 TMPRSS9Q7Z410 1059 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 ZNF761Q86XN6 746 aaPredicted RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 RAVER1Q8IY67 606 aaKnown RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 SDR16C5Q8N3Y7 309 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 RASGEF1CQ8N431 466 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 ARL10Q8N8L6 244 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 Q8N9G6 341 aaPredicted RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 ZDHHC1Q8WTX9 485 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 ZSCAN5AQ9BUG6 496 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 ARNT2Q9HBZ2 717 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 TRNAU1APQ9NX07 287 aaKnown RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 TBC1D29Q9UFV1 150 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 AAR2Q9Y312 384 aaKnown RBP13.42□□□□□ -0.26
SNF8-206ENST00000509989 FREM2Q5SZK8 3169 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 DMXL2Q8TDJ6 3036 aa13.42□□□□□ -0.26
SNF8-206ENST00000509989 KMT2BQ9UMN6 2715 aaPredicted RBP13.41□□□□□ -0.26
SNF8-206ENST00000509989 APC2O95996 2303 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 PRAMEF33A0A0G2JMD5 474 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 GLYATL1P3A0A0U1RQE8 302 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 PPM1DO15297 605 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 STX7O15400 261 aaKnown RBP13.41□□□□□ -0.26
SNF8-206ENST00000509989 AP2A1O95782 977 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 JUPP14923 745 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 SPAM1P38567 509 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 ARSDP51689 593 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 POU6F1Q14863 301 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 TAF1AQ15573 450 aaPredicted RBP13.41□□□□□ -0.26
SNF8-206ENST00000509989 P3H1Q32P28 736 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 LVRNQ6Q4G3 990 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 XKR5Q6UX68 686 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 C11orf96Q7Z7L8 435 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 C17orf82Q86X59 251 aaPredicted RBP13.41□□□□□ -0.26
SNF8-206ENST00000509989 GALNT13Q8IUC8 556 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 ARL14Q8N4G2 192 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 MAPK15Q8TD08 544 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 DNAJC1Q96KC8 554 aaKnown RBP13.41□□□□□ -0.26
SNF8-206ENST00000509989 PLEKHG4BQ96PX9 1271 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 GSDMCQ9BYG8 508 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 TRABDQ9H4I3 376 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 SYNDIG1Q9H7V2 258 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 TRIM39Q9HCM9 518 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
SNF8-206ENST00000509989 HACD3Q9P035 362 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 SCHIP1Q9P0W5 487 aaPredicted RBP13.41□□□□□ -0.26
SNF8-206ENST00000509989 VPS18Q9P253 973 aa13.41□□□□□ -0.26
SNF8-206ENST00000509989 ATXN7L1Q9ULK2 861 aaPredicted RBP13.41□□□□□ -0.26
SNF8-206ENST00000509989 OR51F1A6NGY5 319 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 CHUKO15111 745 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 GRID2O43424 1007 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 B4GAT1O43505 415 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 NRDCO43847 1150 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 LPOP22079 712 aaPredicted RBP13.4□□□□□ -0.26
SNF8-206ENST00000509989 B4GALNT1Q00973 533 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 ILF3Q12906 894 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNF8-206ENST00000509989 ILKQ13418 452 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 C14orf28Q4W4Y0 310 aa13.4□□□□□ -0.26
SNF8-206ENST00000509989 GPRC6AQ5T6X5 926 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms