RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, human

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-208	ENST00000509620	SLC28A3	Q9HAS3	691 aa		4.18	□□□□□ -1.74
OTUD4-208	ENST00000509620	UBA2	Q9UBT2	640 aa	Predicted RBP	4.18	□□□□□ -1.74
OTUD4-208	ENST00000509620	WNT16	Q9UBV4	365 aa		4.18	□□□□□ -1.74
OTUD4-208	ENST00000509620	FBXW11	Q9UKB1	542 aa		4.18	□□□□□ -1.74
OTUD4-208	ENST00000509620	ZNF711	Q9Y462	761 aa		4.18	□□□□□ -1.74
OTUD4-208	ENST00000509620	CMAHP	Q9Y471	501 aa		4.18	□□□□□ -1.74
OTUD4-208	ENST00000509620	LRRC72	A6NJI9	287 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	OGG1	O15527	345 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	PLRG1	O43660	514 aa	Known RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	ZBTB11	O95625	1053 aa	Predicted RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	PPP1R3D	O95685	299 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	HIST1H2AB	P04908	130 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	APOA4	P06727	396 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	T-ENOL	P0DO92	83 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	IGHV4-30-4	P0DP06	118 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	FCGR1A	P12314	374 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	HIST1H2AD	P20671	130 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	STX2	P32856	288 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	PRCP	P42785	496 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	STAT2	P52630	851 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	PSMC6	P62333	389 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	MRPS5	P82675	430 aa	Known RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	CDC16	Q13042	620 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	BAAT	Q14032	418 aa	Predicted RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	HLF	Q16534	295 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	AMZ1	Q400G9	498 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	KRT79	Q5XKE5	535 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	SIGIRR	Q6IA17	410 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	RHBDF2	Q6PJF5	856 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	HIST3H2A	Q7L7L0	130 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	TAOK1	Q7L7X3	1001 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	RBM23	Q86U06	439 aa	Known RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	TSPAN33	Q86UF1	283 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	LINC00346	Q8IVM7	164 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	MCEMP1	Q8IX19	187 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	DSEL	Q8IZU8	1212 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	OR2AK2	Q8NG84	335 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	OR14L1P	Q8NHC6	308 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	TRPC4AP	Q8TEL6	797 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	RADIL	Q96JH8	1075 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	CNDP2	Q96KP4	475 aa	Known RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	SRSF8	Q9BRL6	282 aa	Known RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	PCGF1	Q9BSM1	259 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	KIFC3	Q9BVG8	833 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	APOL6	Q9BWW8	343 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	MMP25	Q9NPA2	562 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	TAB2	Q9NYJ8	693 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	WSB2	Q9NYS7	404 aa	Predicted RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	COPG2	Q9UBF2	871 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	PPIE	Q9UNP9	301 aa	Known RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	SNX9	Q9Y5X1	595 aa		4.17	□□□□□ -1.74
OTUD4-208	ENST00000509620	KANSL1L	A0AUZ9	987 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	UBE2C	O00762	179 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	PAPSS1	O43252	624 aa	Predicted RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	KDM4B	O94953	1096 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	CLDN14	O95500	239 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	SELL	P14151	372 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	UBA1	P22314	1058 aa	Known RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	FASLG	P48023	281 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	KIF5A	Q12840	1032 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	TNFAIP1	Q13829	316 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	CCDC184	Q52MB2	194 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	RARS2	Q5T160	578 aa	Known RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	SLC36A4	Q6YBV0	504 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	CREB3L2	Q70SY1	520 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	ARMC9	Q7Z3E5	817 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	KBTBD6	Q86V97	674 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	SYT2	Q8N9I0	419 aa	Predicted RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	HJURP	Q8NCD3	748 aa	Predicted RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	APPL2	Q8NEU8	664 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	HMGCLL1	Q8TB92	370 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	WFIKKN2	Q8TEU8	576 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	LRRC59	Q96AG4	307 aa	Known RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	NUDCD1	Q96RS6	583 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	KXD1	Q9BQD3	176 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	MAGIX	Q9H6Y5	334 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	GAREM1	Q9H706	876 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	SEBOX	Q9HB31	216 aa	Predicted RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	ARHGEF38	Q9NXL2	777 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	GIMAP2	Q9UG22	337 aa		4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	PTRH2	Q9Y3E5	179 aa	Known RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	ATXN2	Q99700	1313 aa	Known RBP	4.16	□□□□□ -1.74
OTUD4-208	ENST00000509620	TAF1	P21675	1872 aa		4.15	□□□□□ -1.74
OTUD4-208	ENST00000509620	C1orf226	A1L170	272 aa		4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	GOLGA6L9	A6NEM1	432 aa		4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	C4orf47	A7E2U8	309 aa		4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620		H7C0S8	307 aa		4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	MAP2K7	O14733	419 aa		4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	AVIL	O75366	819 aa		4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	DDN	O94850	711 aa	Predicted RBP	4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	TUBB	P07437	444 aa		4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	ABCB1	P08183	1280 aa	Predicted RBP	4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	ANXA7	P20073	488 aa	Known RBP	4.15	□□□□□ -1.75
OTUD4-208	ENST00000509620	ACADL	P28330	430 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms