RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 NCF1BA6NI72 391 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 NCF1CA8MVU1 366 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 CYBBP04839 570 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 RHOCP08134 193 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 UROSP10746 265 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 NCF1P14598 390 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 PKMP14618 531 aaKnown RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 PSMA4P25789 261 aaKnown RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 RPS24P62847 133 aaKnown RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ELAVL2Q12926 359 aaKnown RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 GRIK2Q13002 908 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 FBXO48Q5FWF7 155 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 PPP4R4Q6NUP7 873 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 B3GNT6Q6ZMB0 384 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 CARM1Q86X55 608 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 C1QTNF3Q9BXJ4 246 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 MARCH5Q9NX47 278 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ACTR3BQ9P1U1 418 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 THEGQ9P2T0 379 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 IKZF3Q9UKT9 509 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 TMCO1Q9UM00 188 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 RNF11Q9Y3C5 154 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 TIMM22Q9Y584 194 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 GPR45Q9Y5Y3 372 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ILVBLA1L0T0 632 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 TMEM88BA6NKF7 163 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 C9JVG2 144 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 HTRA2O43464 458 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 SNX2O60749 519 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ESRRBO95718 433 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 CR2P20023 1033 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 SLC6A2P23975 617 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 PSMA3P25788 255 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 SLC11A1P49279 550 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 PRKCQQ04759 706 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ZNF177Q13360 481 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 RBBP7Q16576 425 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 RTP2Q5QGT7 225 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 LCN8Q6JVE9 175 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 KLHDC10Q6PID8 442 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 EP400NLQ6ZTU2 488 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ANKS3Q6ZW76 656 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 SPPL2CQ8IUH8 684 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 DENND1CQ8IV53 801 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 TSPAN14Q8NG11 270 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ZNF512Q96ME7 567 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 BIRC8Q96P09 236 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 HGH1Q9BTY7 390 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 TTLL2Q9BWV7 592 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ADGRE3Q9BY15 652 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 TRIM54Q9BYV2 358 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 ELAC1Q9H777 363 aaKnown RBP17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 CMTM6Q9NX76 183 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 EGFL7Q9UHF1 273 aa17.81■□□□□ 0.44
CCHCR1-228ENST00000509552 GREB1Q4ZG55 1949 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 A0A1B0GTL3 188 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 A0A1W2PP18 115 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 FAM155AB1AL88 458 aaPredicted RBP17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 H3BNC9 293 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 FXYD1O00168 92 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 KLK8O60259 260 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 TBC1D4O60343 1298 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 CKMT2P17540 419 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 ATF6P18850 670 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 MC4RP32245 332 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 TM4SF4P48230 202 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 DIO3P55073 304 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 IL2P60568 153 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 ECT2LQ008S8 904 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 NFYCQ13952 458 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 MYLK3Q32MK0 819 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 PACRGLQ8N7B6 248 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 OR56A4Q8NGH8 313 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 MPP4Q96JB8 637 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 NSMCE3Q96MG7 304 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 PNPLA3Q9NST1 481 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 MYRFQ9Y2G1 1151 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 RAI2Q9Y5P3 530 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 CEP350Q5VT06 3117 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 TYW5A2RUC4 315 aaKnown RBP17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 CBX4O00257 560 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 H6PDO95479 791 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 PRLP01236 227 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 CDKN1CP49918 316 aaPredicted RBP17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 SYVN1Q86TM6 617 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 CAMK1DQ8IU85 385 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 TRIML2Q8N7C3 387 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 ZFP28Q8NHY6 868 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 CASD1Q96PB1 797 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 AIG1Q9NVV5 245 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 FKBPLQ9UIM3 349 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 PCTPQ9UKL6 214 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 PCDHGC4Q9Y5F7 938 aa17.8■□□□□ 0.44
CCHCR1-228ENST00000509552 STX7O15400 261 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-228ENST00000509552 PRR35P0CG20 571 aa17.79■□□□□ 0.44
CCHCR1-228ENST00000509552 CD9P21926 228 aa17.79■□□□□ 0.44
CCHCR1-228ENST00000509552 FASP25445 335 aa17.79■□□□□ 0.44
CCHCR1-228ENST00000509552 MRPL19P49406 292 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-228ENST00000509552 AGTR2P50052 363 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms