RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SLC25A14O95258 325 aaPredicted RBP15.23■□□□□ 0.03
TPM3-219ENST00000509409 PIRTP0C851 137 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 THRAP10827 490 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 SLC2A4P14672 509 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 CSF2RBP32927 897 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 DYNLT1P63172 113 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 CYP4F2P78329 520 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 NFATC3Q12968 1075 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 LINC00303Q3SY05 128 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 ZNF569Q5MCW4 686 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.23■□□□□ 0.03
TPM3-219ENST00000509409 ZNF648Q5T619 568 aaPredicted RBP15.23■□□□□ 0.03
TPM3-219ENST00000509409 DCAF12Q5T6F0 453 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 XKR5Q6UX68 686 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 B4GALNT4Q76KP1 1039 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 RHOT2Q8IXI1 618 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 IL22RA1Q8N6P7 574 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 CHP1Q99653 195 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 ASPSCR1Q9BZE9 553 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 GPR63Q9BZJ6 419 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 FAM117AQ9C073 453 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 OR2AG1Q9H205 316 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 CARD9Q9H257 536 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 NHEJ1Q9H9Q4 299 aaPredicted RBP15.23■□□□□ 0.03
TPM3-219ENST00000509409 SARS2Q9NP81 518 aaKnown RBP15.23■□□□□ 0.03
TPM3-219ENST00000509409 RAD18Q9NS91 495 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 SPTLC3Q9NUV7 552 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 OCIAD1Q9NX40 245 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 PCDHGA4Q9Y5G9 962 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 HEMK1Q9Y5R4 338 aaPredicted RBP15.23■□□□□ 0.03
TPM3-219ENST00000509409 B3GALT1Q9Y5Z6 326 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 AHCTF1Q8WYP5 2266 aa15.23■□□□□ 0.03
TPM3-219ENST00000509409 ZNF487B1APH4 448 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 SLC28A2O43868 658 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 NUAK1O60285 661 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 ITGB2P05107 769 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 ZNF8P17098 575 aaPredicted RBP15.22■□□□□ 0.03
TPM3-219ENST00000509409 CDK18Q07002 472 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 SLC9A4Q6AI14 798 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 PHYKPLQ8IUZ5 450 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 NKD1Q969G9 470 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 PMEPA1Q969W9 287 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 IMP4Q96G21 291 aaKnown RBP15.22■□□□□ 0.03
TPM3-219ENST00000509409 HERPUD2Q9BSE4 406 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.22■□□□□ 0.03
TPM3-219ENST00000509409 BRD8Q9H0E9 1235 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 SLC25A51Q9H1U9 297 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 OSGEPL1Q9H4B0 414 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 TRIM39Q9HCM9 518 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 KLC4Q9NSK0 619 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 DDX56Q9NY93 547 aaKnown RBP15.22■□□□□ 0.03
TPM3-219ENST00000509409 ATXN10Q9UBB4 475 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 PCDHGA3Q9Y5H0 932 aa15.22■□□□□ 0.03
TPM3-219ENST00000509409 KIR2DS5A0A0G2JLQ3 304 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 A0A0G2JNG1 304 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 C3orf70A6NLC5 250 aaPredicted RBP15.21■□□□□ 0.03
TPM3-219ENST00000509409 OR5K4A6NMS3 321 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 B4E171 279 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.21■□□□□ 0.03
TPM3-219ENST00000509409 KIR2DS3K7RE56 304 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 WT1P19544 449 aaPredicted RBP15.21■□□□□ 0.03
TPM3-219ENST00000509409 TSPAN7P41732 249 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 RAB15P59190 212 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 KIR2DS5Q14953 304 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 TBR1Q16650 682 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 WDR74Q6RFH5 385 aaPredicted RBP15.21■□□□□ 0.03
TPM3-219ENST00000509409 BZW1Q7L1Q6 419 aaKnown RBP15.21■□□□□ 0.03
TPM3-219ENST00000509409 PRICKLE2Q7Z3G6 844 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 TMC3Q7Z5M5 1100 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 VSIG1Q86XK7 387 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 RHOT1Q8IXI2 618 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 CACNA2D3Q8IZS8 1091 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 GPR26Q8NDV2 337 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 EID2BQ96D98 161 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 ZSCAN5AQ9BUG6 496 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 DDA1Q9BW61 102 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 GLOD4Q9HC38 313 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 MAGEE1Q9HCI5 957 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 PRDM8Q9NQV8 689 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 ABHD10Q9NUJ1 306 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 KLHL3Q9UH77 587 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 HYOU1Q9Y4L1 999 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 ZNF462Q96JM2 2506 aa15.21■□□□□ 0.03
TPM3-219ENST00000509409 HELZ2Q9BYK8 2649 aaKnown RBP15.2■□□□□ 0.02
TPM3-219ENST00000509409 SPOPO43791 374 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 RAD1O60671 282 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 PMPCBO75439 489 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 MT-CYBP00156 380 aaPredicted RBP15.2■□□□□ 0.02
TPM3-219ENST00000509409 FAM87AP0C7U9 286 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 SFTPCP11686 197 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 F3P13726 295 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 UGT1A3P35503 534 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 SLC1A1P43005 524 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 NOP2P46087 812 aaKnown RBP15.2■□□□□ 0.02
TPM3-219ENST00000509409 INSCQ1MX18 579 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 SKOR2Q2VWA4 1001 aaPredicted RBP15.2■□□□□ 0.02
TPM3-219ENST00000509409 PLA2G4EQ3MJ16 856 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 TEX44Q53QW1 395 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 LRRC38Q5VT99 294 aa15.2■□□□□ 0.02
TPM3-219ENST00000509409 KAZNQ674X7 775 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms