RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 OR4C6Q8NH72 309 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 ZNF398Q8TD17 642 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 OR1E3Q8WZA6 343 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 TSACCQ96A04 125 aaPredicted RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 PDXPQ96GD0 296 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 DCUN1D1Q96GG9 259 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 SCARF2Q96GP6 870 aaPredicted RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 OR2M4Q96R27 311 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 LRRC61Q9BV99 259 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 LGR4Q9BXB1 951 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 RAB17Q9H0T7 212 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 ASB8Q9H765 288 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 VPS37BQ9H9H4 285 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 MRM3Q9HC36 420 aaKnown RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 CYP4F12Q9HCS2 524 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 FGF22Q9HCT0 170 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 CRLS1Q9UJA2 301 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 PCOLCE2Q9UKZ9 415 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 UTP11Q9Y3A2 253 aaKnown RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 TCAF1Q9Y4C2 921 aa9.06□□□□□ -0.96
NUP54-207ENST00000508583 ZNF106Q9H2Y7 1883 aaKnown RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 TDRD6O60522 2096 aaKnown RBP9.06□□□□□ -0.96
NUP54-207ENST00000508583 COL5A1P20908 1838 aaPredicted RBP9.05□□□□□ -0.96
NUP54-207ENST00000508583 SDR42E2A6NKP2 422 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 DNALI1O14645 258 aaPredicted RBP9.05□□□□□ -0.96
NUP54-207ENST00000508583 TM4SF5O14894 197 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 FANCGO15287 622 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 TNFSF14O43557 240 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 SH3BP5O60239 455 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 NUAK1O60285 661 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 KCNJ13O60928 360 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 SDC3O75056 442 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 CDK14O94921 469 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 TRIM16O95361 564 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 LDOC1O95751 146 aaPredicted RBP9.05□□□□□ -0.96
NUP54-207ENST00000508583 CEACAM5P06731 702 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 SLC2A4P14672 509 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 PSMA3P25788 255 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 AKT1P31749 480 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 MC4RP32245 332 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 GNPDA1P46926 289 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 CACNG1Q06432 222 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 CALCOCO2Q13137 446 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 ILKQ13418 452 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 MSLNQ13421 630 aaPredicted RBP9.05□□□□□ -0.96
NUP54-207ENST00000508583 OLIG2Q13516 323 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 SHBQ15464 509 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 TRIP6Q15654 476 aaKnown RBP9.05□□□□□ -0.96
NUP54-207ENST00000508583 CHRNA6Q15825 494 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 ATP13A5Q4VNC0 1218 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 ZNF542PQ5EBM4 170 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 PRAMEF14Q5SWL7 426 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 TPRG1LQ5T0D9 272 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 C6orf132Q5T0Z8 1188 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 TSTD2Q5T7W7 516 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 CASC4Q6P4E1 433 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 DOK6Q6PKX4 331 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 CERS6Q6ZMG9 384 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 KDM7AQ6ZMT4 941 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 DGLUCYQ7Z3D6 616 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 RD3Q7Z3Z2 195 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 TAF8Q7Z7C8 310 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 GLRX5Q86SX6 157 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 GATAD2AQ86YP4 633 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 PDIK1LQ8N165 341 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 FAM181AQ8N9Y4 354 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 AVL9Q8NBF6 648 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 DDHD1Q8NEL9 900 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 OR6C4Q8NGE1 309 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 CPT1BQ92523 772 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 NAT6Q93015 286 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 SNF8Q96H20 258 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 SGSM3Q96HU1 749 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 DNAJC1Q96KC8 554 aaKnown RBP9.05□□□□□ -0.96
NUP54-207ENST00000508583 KRT12Q99456 494 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 AGAP2Q99490 1192 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 NAT9Q9BTE0 207 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 ZNHIT2Q9UHR6 403 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 FKBPLQ9UIM3 349 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 ANAPC5Q9UJX4 755 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 SUFUQ9UMX1 484 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 APOBEC2Q9Y235 224 aaKnown RBP9.05□□□□□ -0.96
NUP54-207ENST00000508583 GPSM3Q9Y4H4 160 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 PCNX2A6NKB5 2137 aa9.05□□□□□ -0.96
NUP54-207ENST00000508583 CNOT1A5YKK6 2376 aaKnown RBP9.05□□□□□ -0.96
NUP54-207ENST00000508583 EFCAB8A8MWE9 144 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 KMOO15229 486 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 FFAR2O15552 330 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TTI1O43156 1089 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 GRID2O43424 1007 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 BUD23O43709 281 aaKnown RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 CBFA2T3O75081 653 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TTC4O95801 387 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 GSTM1P09488 218 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TMPRSS15P98073 1019 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 DAB2P98082 770 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 GSTM4Q03013 218 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 ACVR1Q04771 509 aa9.04□□□□□ -0.96
NUP54-207ENST00000508583 TMEM115Q12893 351 aaPredicted RBP9.04□□□□□ -0.96
NUP54-207ENST00000508583 BNIP3Q12983 259 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms