RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 BEND6Q5SZJ8 279 aaPredicted RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 DENND2CQ68D51 928 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 NEPROQ6NW34 567 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 MARK2Q7KZI7 788 aaKnown RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 RABEPKQ7Z6M1 372 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 PACS2Q86VP3 889 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 CCDC25Q86WR0 208 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 LRRC6Q86X45 466 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 ANKMY2Q8IV38 441 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 NXPE1Q8N323 547 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 FRMD1Q8N878 549 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 MFSD2AQ8NA29 543 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 C2CD4AQ8NCU7 369 aaPredicted RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 CDKL2Q92772 493 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 SCAMP4Q969E2 229 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 GLYATL1Q969I3 302 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.57□□□□□ -1.04
USP46-207ENST00000508499 SCARF2Q96GP6 870 aaPredicted RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 ZNF514Q96K75 400 aaPredicted RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 C9orf72Q96LT7 481 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 CYTH2Q99418 400 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 TTC1Q99614 292 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 RIOK2Q9BVS4 552 aaKnown RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 RMI1Q9H9A7 625 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 CATSPERZQ9NTU4 200 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 SUSD2Q9UGT4 822 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 FKBPLQ9UIM3 349 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 CNOT6Q9ULM6 557 aaKnown RBP8.57□□□□□ -1.04
USP46-207ENST00000508499 GPR34Q9UPC5 381 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 COQ6Q9Y2Z9 468 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 PCDHGA5Q9Y5G8 931 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 COMMD10Q9Y6G5 202 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 PI4KAP42356 2102 aa8.57□□□□□ -1.04
USP46-207ENST00000508499 A0A1W2PR77 199 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 A6NNZ2 444 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 VEGFDO43915 354 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 AP2A2O94973 939 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 KELP23276 732 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 IGFALSP35858 605 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 NSG1P42857 185 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 PTGER3P43115 390 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 GPR1P46091 355 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 POLD2P49005 469 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 CSE1LP55060 971 aaKnown RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 CDK3Q00526 305 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 SEMG2Q02383 582 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 INPP5AQ14642 412 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 PTPRCAPQ14761 206 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 STAT4Q14765 748 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 CHRNA6Q15825 494 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 KLHL38Q2WGJ6 581 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 FASTKD1Q53R41 847 aaKnown RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 TEDDM1Q5T9Z0 273 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 TRMT10BQ6PF06 316 aaKnown RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 FAM151BQ6UXP7 276 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 GCNT7Q6ZNI0 430 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 RFLNAQ6ZTI6 216 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 SDCCAG8Q86SQ7 713 aaPredicted RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 PHYKPLQ8IUZ5 450 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 HIC2Q96JB3 615 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 BMFQ96LC9 184 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 LINC00615Q96LM1 132 aaPredicted RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 HSPA12BQ96MM6 686 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 CPNE1Q99829 537 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 TRIM56Q9BRZ2 755 aaKnown RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 DHRS4Q9BTZ2 278 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 TMEM109Q9BVC6 243 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 SPATA16Q9BXB7 569 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 ZCCHC2Q9C0B9 1178 aaKnown RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 ASB8Q9H765 288 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 SUDS3Q9H7L9 328 aaPredicted RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 TRIM39Q9HCM9 518 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 BPIFA1Q9NP55 256 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 MBNL1Q9NR56 388 aaKnown RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 C20orf96Q9NUD7 363 aaPredicted RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 ARGLU1Q9NWB6 273 aaPredicted RBP8.56□□□□□ -1.04
USP46-207ENST00000508499 ZDHHC3Q9NYG2 299 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 ZFATQ9P243 1243 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 ZNF180Q9UJW8 692 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 PILRBQ9UKJ0 227 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 TMPRSS11EQ9UL52 423 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 SLC17A4Q9Y2C5 497 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 TMEM131Q92545 1883 aa8.56□□□□□ -1.04
USP46-207ENST00000508499 FAM47DPA6NHR8 397 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 C3orf80F5H4A9 247 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 F8W8V4 182 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 K7ESM1 405 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 CHUKO15111 745 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 VILLO15195 856 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 RAD51BO15315 384 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 SLC31A1O15431 190 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 BUD23O43709 281 aaKnown RBP8.55□□□□□ -1.04
USP46-207ENST00000508499 FSBPO95073 299 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 S1PR4O95977 384 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 RALBP11234 206 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 CNTFP26441 200 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 CD38P28907 300 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 MAT2AP31153 395 aaKnown RBP8.55□□□□□ -1.04
USP46-207ENST00000508499 HSD17B3P37058 310 aa8.55□□□□□ -1.04
USP46-207ENST00000508499 AFF3P51826 1226 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms