RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 GSNP06396 782 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 ALPIP09923 528 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 ALOX15P16050 662 aaPredicted RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 NR4A1P22736 598 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 RECQLP46063 649 aaPredicted RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 DGKQP52824 942 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 YBEYP58557 167 aaPredicted RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 VAC14Q08AM6 782 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 CMPK2Q5EBM0 449 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 LRRC73Q5JTD7 316 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 ARMC12Q5T9G4 340 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 CHST15Q7LFX5 561 aaPredicted RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 IFNL1Q8IU54 200 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 NAT16Q8N8M0 369 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 OR13J1Q8NGT2 312 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 EEF1AKMT1Q8WVE0 214 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 DGCR6LQ9BY27 220 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 RUBCNLQ9H714 662 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 PARVBQ9HBI1 364 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 TNFRSF12AQ9NP84 129 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 RAD51BO15315 384 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 ZNF7P17097 686 aaPredicted RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 AP5B1Q2VPB7 878 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 XKR4Q5GH76 650 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 FOXB2Q5VYV0 432 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 RNF19BQ6ZMZ0 732 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 ZNF555Q8NEP9 628 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 BDH2Q9BUT1 245 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 TRIM54Q9BYV2 358 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 EVLQ9UI08 416 aaPredicted RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 SCML2Q9UQR0 700 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 PCDHGA7Q9Y5G6 932 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 FADS3Q9Y5Q0 445 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 GDF5P43026 501 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 GALK1P51570 392 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 KPNA1P52294 538 aaPredicted RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 POLR2JP52435 117 aaKnown RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 IKBKEQ14164 716 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 POM121L1PQ3SYA9 428 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 CACHD1Q5VU97 1274 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 SPESP1Q6UW49 350 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 SLC29A1Q99808 456 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 PAIP1Q9H074 479 aaKnown RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 CLK4Q9HAZ1 481 aaKnown RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 OPTCQ9UBM4 332 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 RSL24D1Q9UHA3 163 aaKnown RBP12.79□□□□□ -0.36
SMG7-214ENST00000508461 WDR81Q562E7 1941 aa12.79□□□□□ -0.36
SMG7-214ENST00000508461 H3BNX3 289 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 GJB5O95377 273 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 MLYCDO95822 493 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 SBK3P0C264 359 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 FAM163BP0C2L3 166 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 SLC7A1P30825 629 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 ATP6V0D1P61421 351 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 SERINC3Q13530 473 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 LRRC58Q96CX6 371 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 TREX1Q9NSU2 369 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 UBAP1Q9NZ09 502 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 KIF17Q9P2E2 1029 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 A0A087WXM4 84 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 HS6ST1O60243 411 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 TBC1D4O60343 1298 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 CD1DP15813 335 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 UGT1A1P22309 533 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 UGT1A4P22310 534 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 PRDX3P30048 256 aaKnown RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 HTR7P34969 479 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 UGT1A3P35503 534 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 UGT1A5P35504 534 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 RPL34P49207 117 aaKnown RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 ZNF33AQ06730 810 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 FAM98BQ52LJ0 330 aaKnown RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 GLYATQ6IB77 296 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 KDELC1Q6UW63 502 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 UMODL1-AS1Q8N2C9 162 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 HOPXQ9BPY8 73 aaPredicted RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 AARSD1Q9BTE6 412 aaKnown RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 TTPALQ9BTX7 342 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 CIPCQ9C0C6 399 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 TNKS2Q9H2K2 1166 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 ELOVL6Q9H5J4 265 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 LSM7Q9UK45 103 aaKnown RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 HOXB8P17481 243 aaPredicted RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 GKP32189 559 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 STC1P52823 247 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 ADRM1Q16186 407 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 SLC2A7Q6PXP3 512 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 OR10Q1Q8NGQ4 319 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 FAM120BQ96EK7 910 aaKnown RBP12.78□□□□□ -0.36
SMG7-214ENST00000508461 GSTO2Q9H4Y5 243 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 IPPKQ9H8X2 491 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.78□□□□□ -0.36
SMG7-214ENST00000508461 TMEM248Q9NWD8 314 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 ARL15Q9NXU5 204 aa12.78□□□□□ -0.36
SMG7-214ENST00000508461 ETAA1Q9NY74 926 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms