RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 PHPT1Q9NRX4 125 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-221ENST00000507845 SMOXQ9NWM0 555 aa13.36□□□□□ -0.27
UBE2D3-221ENST00000507845 SLC6A14Q9UN76 642 aa13.36□□□□□ -0.27
UBE2D3-221ENST00000507845 ANKRD6Q9Y2G4 727 aa13.36□□□□□ -0.27
UBE2D3-221ENST00000507845 SLC30A1Q9Y6M5 507 aa13.36□□□□□ -0.27
UBE2D3-221ENST00000507845 RPS6KL1Q9Y6S9 549 aa13.36□□□□□ -0.27
UBE2D3-221ENST00000507845 ZFHX2Q9C0A1 2572 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 RIF1Q5UIP0 2472 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 TRBV5-4A0A0C4DH59 114 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 AGAP14A8MT82 685 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 CACNB4O00305 520 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 MAGEC1O60732 1142 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 GOT2P00505 430 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 POLBP06746 335 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 PRSS56P0CW18 603 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 ITGALP20701 1170 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 FOXN2P32314 431 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 CTSKP43235 329 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 ARCN1P48444 511 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 THOP1P52888 689 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 C21orf59P57076 290 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 PRAMEP78395 509 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 CACNG1Q06432 222 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 PDE1CQ14123 709 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 CRYMQ14894 314 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 KIF19Q2TAC6 998 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 ZRANB3Q5FWF4 1079 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 STEAP4Q687X5 459 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 MACC1Q6ZN28 852 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 SNX20Q7Z614 316 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 TRIM74Q86UV6 250 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 CCDC25Q86WR0 208 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 CCNJLQ8IV13 435 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 ZBED8Q8IZ13 594 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 FBXO36Q8NEA4 188 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 OR6P1Q8NGX9 317 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 OR4L1Q8NH43 312 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 SKA1Q96BD8 255 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 CFAP36Q96G28 342 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 SGSM3Q96HU1 749 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 FMO2Q99518 471 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 FSCN3Q9NQT6 498 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 NCDNQ9UBB6 729 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 MTRF1LQ9UGC7 380 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 ZC3H7BQ9UGR2 993 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 NFU1Q9UMS0 254 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 OAS3Q9Y6K5 1087 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 FAM169AQ9Y6X4 670 aa13.35□□□□□ -0.27
UBE2D3-221ENST00000507845 SPTY2D1-AS1A0A0U1RR47 76 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 TMEM202A6NGA9 273 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 SLC25A14O95258 325 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 VAPBO95292 243 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 TTC4O95801 387 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 ZNF806P0C7X5 589 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 PAMP19021 973 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 CDKN1CP49918 316 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 IRX4P78413 519 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 GRIK2Q13002 908 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 PTK2BQ14289 1009 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 FZD2Q14332 565 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 GPR33Q49SQ1 333 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 KHDC1Q4VXA5 237 aaKnown RBP13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 SPANXN3Q5MJ09 141 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 GPRC6AQ5T6X5 926 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 TCEAL6Q6IPX3 200 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 PSAPL1Q6NUJ1 521 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 UNC5AQ6ZN44 842 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 PHYKPLQ8IUZ5 450 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 PIANPQ8IYJ0 282 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 NXPE1Q8N323 547 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 DDHD1Q8NEL9 900 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 PYROXD1Q8WU10 500 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 UBXN4Q92575 508 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 RUBCNQ92622 972 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 TCEAL3Q969E4 200 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 ULK4Q96C45 1275 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 WDR92Q96MX6 357 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 ARFGAP3Q9NP61 516 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 CRLS1Q9UJA2 301 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 SNX11Q9Y5W9 270 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 V9GYY5 206 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 ZNF292O60281 2723 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 FAM186AA6NE01 2351 aa13.34□□□□□ -0.27
UBE2D3-221ENST00000507845 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 LRP3O75074 770 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 CEACAM5P06731 702 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 KELP23276 732 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 HTR1BP28222 390 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 TNFRSF8P28908 595 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 MAGEA4P43358 317 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 SPEM2Q0P670 501 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 EIF2B5Q13144 721 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 SEMA3AQ14563 771 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 SMAD1Q15797 465 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 LONRF1Q17RB8 773 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 ERCC6LQ2NKX8 1250 aa13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 FASTKD1Q53R41 847 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-221ENST00000507845 LDLRAP1Q5SW96 308 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms