RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 PROSCO94903 275 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 HEXIM1O94992 359 aaKnown RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 MT-CO3P00414 261 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 KRT7P08729 469 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 C6P13671 934 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TCF4P15884 667 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 MAN1A1P33908 653 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TRIM23P36406 574 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ATP1A2P50993 1020 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ARSEP51690 589 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 PPARDQ03181 441 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TMED1Q13445 227 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 MTM1Q13496 603 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 CUL3Q13618 768 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 KRT81Q14533 505 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ZNF235Q14590 738 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 INPP5AQ14642 412 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 PAFAH1B3Q15102 231 aaKnown RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ELOCQ15369 112 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 SMTNL2Q2TAL5 461 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 LRRC73Q5JTD7 316 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TPRG1LQ5T0D9 272 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 FAXCQ5TGI0 409 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TXNRD3NBQ6F5E7 133 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 HIBCHQ6NVY1 386 aaPredicted RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 LIPIQ6XZB0 460 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 DPPA4Q7L190 304 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TAOK1Q7L7X3 1001 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 PIGWQ7Z7B1 504 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ZSWIM9Q86XI8 627 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TP53INP2Q8IXH6 220 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 RAVER1Q8IY67 606 aaKnown RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 NDUFAF2Q8N183 169 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 CBARPQ8N350 705 aaPredicted RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 WDR48Q8TAF3 677 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 MDM1Q8TC05 714 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 LMX1AQ8TE12 382 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 FBF1Q8TES7 1133 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 SCG3Q8WXD2 468 aaKnown RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 CTNNBL1Q8WYA6 563 aaPredicted RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 NXPE2Q96DL1 559 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TSGA13Q96PP4 275 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 NAP1L3Q99457 506 aaPredicted RBP8.02□□□□□ -1.13
SCN1A-207ENST00000507401 MGME1Q9BQP7 344 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 APOOQ9BUR5 198 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 TMEM109Q9BVC6 243 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 BOCQ9BWV1 1114 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 RAB17Q9H0T7 212 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ABCG4Q9H172 646 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 VCX3BQ9H321 246 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ETNK1Q9HBU6 452 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 VCX3AQ9NNX9 186 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ETNK2Q9NVF9 386 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 HAUS2Q9NVX0 235 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 BAIAP2L1Q9UHR4 511 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ITGB1BP2Q9UKP3 347 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 PHTF1Q9UMS5 762 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 PPIL1Q9Y3C6 166 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 LRRC42Q9Y546 428 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 DGKBQ9Y6T7 804 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 ACACAQ13085 2346 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 LRRK1Q38SD2 2015 aa8.02□□□□□ -1.13
SCN1A-207ENST00000507401 URB1O60287 2271 aaKnown RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 MYLKQ15746 1914 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ZFHX4Q86UP3 3567 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ITPR1Q14643 2758 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 FAM208BQ5VWN6 2430 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 LAMA5O15230 3695 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 LY6G6EA0A0G2JKS1 128 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PSMD11O00231 422 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 PDE2AO00408 941 aaPredicted RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 TNFRSF10CO14798 259 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 YY2O15391 372 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 AKR1B10O60218 316 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 COQ9O75208 318 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 GCATO75600 419 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 RECQL5O94762 991 aaPredicted RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 SUN1O94901 812 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 RASGRP1O95267 797 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 TNFP01375 233 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 KRT14P02533 472 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ANXA6P08133 673 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ALPIP09923 528 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 NUDT17P0C025 328 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 TMEM253P0C7T8 217 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ELFN1P0C7U0 828 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 KRT10P13645 584 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 CTSEP14091 401 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 NQO1P15559 274 aaKnown RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 TSHRP16473 764 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 MX2P20592 715 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 DRD4P21917 467 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 KELP23276 732 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 CCNCP24863 283 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 ATP5DP30049 168 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 CTNNA1P35221 906 aaKnown RBP8.01□□□□□ -1.13
SCN1A-207ENST00000507401 MMP13P45452 471 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 GSK3AP49840 483 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 RASSF2P50749 326 aa8.01□□□□□ -1.13
SCN1A-207ENST00000507401 HK3P52790 923 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms