RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 DCAF12Q5T6F0 453 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 IYDQ6PHW0 289 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC9B2Q86UD5 537 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 CACNA2D3Q8IZS8 1091 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 PLD5Q8N7P1 536 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 BMPERQ8N8U9 685 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 EID2BQ96D98 161 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC12A9Q9BXP2 914 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 ADGRE3Q9BY15 652 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 TRIM4Q9C037 500 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 XPO4Q9C0E2 1151 aaKnown RBP11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 BRD8Q9H0E9 1235 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 CARD9Q9H257 536 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 DEF6Q9H4E7 631 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 PDP2Q9P2J9 529 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 ATXN10Q9UBB4 475 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 HEY1Q9Y5J3 304 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.42□□□□□ -0.587e-27■□□□□ 8.4
HMGCS1-204ENST00000507293 PIEZO2Q9H5I5 2752 aa11.42□□□□□ -0.58
HMGCS1-204ENST00000507293 RGSL1A5PLK6 1076 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 NUAK1O60285 661 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 KRT1P04264 644 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 PIRTP0C851 137 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 SFTPCP11686 197 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 F3P13726 295 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC2A4P14672 509 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 ZNF8P17098 575 aaPredicted RBP11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 RAB15P59190 212 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 AP1B1Q10567 949 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 CLCA4Q14CN2 919 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 PCSK7Q16549 785 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 PLA2G4EQ3MJ16 856 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 ZNF569Q5MCW4 686 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 WDR74Q6RFH5 385 aaPredicted RBP11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 CRTC3Q6UUV7 619 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 KDELC2Q7Z4H8 507 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 PHYKPLQ8IUZ5 450 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 GPR26Q8NDV2 337 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 NCSTNQ92542 709 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 SH3KBP1Q96B97 665 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 IMP4Q96G21 291 aaKnown RBP11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 TRIB3Q96RU7 358 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 CTRCQ99895 268 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 SPATA16Q9BXB7 569 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 ASPSCR1Q9BZE9 553 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 OR2AG1Q9H205 316 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 OSGEPL1Q9H4B0 414 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 CLMPQ9H6B4 373 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 ZFYVE1Q9HBF4 777 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 CPNE7Q9UBL6 633 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 KLHL3Q9UH77 587 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 SHOC2Q9UQ13 582 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 ZNF711Q9Y462 761 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 ADGRG1Q9Y653 693 aa11.41□□□□□ -0.58
HMGCS1-204ENST00000507293 KIR2DS5A0A0G2JLQ3 304 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 A0A0G2JNG1 304 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 C3orf70A6NLC5 250 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 ZNF487B1APH4 448 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 KIR2DS3K7RE56 304 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 APOL1O14791 398 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 AKR1B10O60218 316 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 PPFIA2O75334 1257 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC25A14O95258 325 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 WISP1O95388 367 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 TPM3P06753 285 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 EPHA4P54764 986 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 DCDC1P59894 354 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 MC2RQ01718 297 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 KIR2DS5Q14953 304 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 ASTE1Q2TB18 679 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC9A4Q6AI14 798 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 NPNTQ6UXI9 565 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 B4GALNT4Q76KP1 1039 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 ARHGAP22Q7Z5H3 698 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 TMC3Q7Z5M5 1100 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 ADGRG6Q86SQ4 1221 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 NT5DC3Q86UY8 548 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 OR8K1Q8NGG5 319 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 SLC35G2Q8TBE7 412 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 RTP4Q96DX8 246 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 AGAP3Q96P47 875 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 TEFMQ96QE5 360 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 DNAJC7Q99615 494 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 TBC1D10AQ9BXI6 508 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 PRDM8Q9NQV8 689 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 KLC4Q9NSK0 619 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 NFKBIL1Q9UBC1 381 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 TENM4Q6N022 2769 aa11.4□□□□□ -0.58
HMGCS1-204ENST00000507293 MYO18BQ8IUG5 2567 aa11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 MN1Q10571 1320 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 SSU72P8A0A1W2PR75 194 aa11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 LILRA5A6NI73 299 aa11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 OR5K4A6NMS3 321 aa11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 PPP1R12AO14974 1030 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 MTA2O94776 668 aa11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 CLCNKAP51800 687 aa11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 DYNLT1P63172 113 aa11.39□□□□□ -0.59
HMGCS1-204ENST00000507293 UBE2IP63279 158 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms