RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ECHS1P30084 290 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 FOXN2P32314 431 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 ELK3P41970 407 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 ARCN1P48444 511 aaKnown RBP12.73□□□□□ -0.37
TCOF1-210ENST00000506767 CACNG1Q06432 222 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 SHBQ15464 509 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 HLA-BQ31612 363 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 KCTD16Q68DU8 428 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 KIAA0930Q6ICG6 404 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-210ENST00000506767 CASC4Q6P4E1 433 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 AFTPHQ6ULP2 937 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 ENPP7Q6UWV6 458 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 PRR23CQ6ZRP0 262 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 TRIM74Q86UV6 250 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 PARGQ86W56 976 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 CCNJLQ8IV13 435 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 GPR161Q8N6U8 529 aaKnown RBP12.73□□□□□ -0.37
TCOF1-210ENST00000506767 DDHD1Q8NEL9 900 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 OR56A4Q8NGH8 313 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 OR4L1Q8NH43 312 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 ELF4Q99607 663 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-210ENST00000506767 PLAC1Q9HBJ0 212 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 TRIM39Q9HCM9 518 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 VPS18Q9P253 973 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 KLF15Q9UIH9 416 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 MAD1L1Q9Y6D9 718 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 SLC30A1Q9Y6M5 507 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 RPS6KL1Q9Y6S9 549 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 DGKBQ9Y6T7 804 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 FAM169AQ9Y6X4 670 aa12.73□□□□□ -0.37
TCOF1-210ENST00000506767 EP300Q09472 2414 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-210ENST00000506767 CACNA1EQ15878 2313 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 A0A1B0GTQ1 180 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 CDX4O14627 284 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-210ENST00000506767 TTC4O95801 387 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 IVLP07476 585 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 RHOXF2BP0C7M4 288 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 PRSS56P0CW18 603 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 NME1P15531 152 aaKnown RBP12.72□□□□□ -0.37
TCOF1-210ENST00000506767 ITGALP20701 1170 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 POLD2P49005 469 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 CDKN1CP49918 316 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-210ENST00000506767 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
TCOF1-210ENST00000506767 TUBB4BP68371 445 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 PRAMEP78395 509 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 PDIA2Q13087 525 aaKnown RBP12.72□□□□□ -0.37
TCOF1-210ENST00000506767 ALG11Q2TAA5 492 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 KHDC1Q4VXA5 237 aaKnown RBP12.72□□□□□ -0.37
TCOF1-210ENST00000506767 LDLRAP1Q5SW96 308 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 PRAMEF14Q5SWL7 426 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 GPRC6AQ5T6X5 926 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 STEAP4Q687X5 459 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 PSAPL1Q6NUJ1 521 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 CENPUQ71F23 418 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 ADGRG6Q86SQ4 1221 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 PHYKPLQ8IUZ5 450 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 PIANPQ8IYJ0 282 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 NXPE1Q8N323 547 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 OXR1Q8N573 874 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 OR1E3Q8WZA6 343 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-210ENST00000506767 ULK4Q96C45 1275 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 RHOXF2Q9BQY4 288 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 FAM96AQ9H5X1 160 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 GAREM1Q9H706 876 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 IL21RQ9HBE5 538 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 FGF22Q9HCT0 170 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 RXFP3Q9NSD7 469 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 KLQ9UEF7 1012 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 TMEM98Q9Y2Y6 226 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 GPR179Q6PRD1 2367 aa12.72□□□□□ -0.37
TCOF1-210ENST00000506767 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 IGLV3-16A0A075B6K0 115 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 PRSS38A1L453 326 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 GPR89AB7ZAQ6 455 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CHUKO15111 745 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 VEGFDO43915 354 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 DNAJC6O75061 913 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 VAPBO95292 243 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CER1O95813 267 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 POLBP06746 335 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 GPR89BP0CG08 455 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 ZNF883P0CG24 379 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 PAMP19021 973 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 ACRV1P26436 265 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CARSP49589 748 aaKnown RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 HK3P52790 923 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 PPARDQ03181 441 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 TMEM115Q12893 351 aaPredicted RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CUL1Q13616 776 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 CRYMQ14894 314 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 FASTKD3Q14CZ7 662 aaKnown RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 ZRANB3Q5FWF4 1079 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 SPANXN3Q5MJ09 141 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 HP1BP3Q5SSJ5 553 aaPredicted RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 TEX35Q5T0J7 233 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 ZNF648Q5T619 568 aaPredicted RBP12.71□□□□□ -0.37
TCOF1-210ENST00000506767 SERPINA9Q86WD7 417 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 IFT20Q8IY31 132 aa12.71□□□□□ -0.37
TCOF1-210ENST00000506767 KIAA2013Q8IYS2 634 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms