RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PRKCGP05129 697 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 CPT2P23786 658 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 GPTP24298 496 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 ATP5F1P24539 256 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 CERS1P27544 350 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 HOXC9P31274 260 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PTH2RP49190 550 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 METAP2P50579 478 aaKnown RBP eCLIP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 SUOXP51687 545 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PPARDQ03181 441 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF91Q05481 1191 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 GRSF1Q12849 480 aaKnown RBP eCLIP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PNLIPRP3Q17RR3 467 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 EPHA10Q5JZY3 1008 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 COLEC12Q5KU26 742 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 STRIP1Q5VSL9 837 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 NUGGCQ68CJ6 796 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 HIST2H2BCQ6DN03 193 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 HIST2H2BDQ6DRA6 164 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF782Q6ZMW2 699 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 DEF8Q6ZN54 512 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PQLC2Q6ZP29 291 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PTF1AQ7RTS3 328 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PATL1Q86TB9 770 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 AACSQ86V21 672 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PALB2Q86YC2 1186 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 LDLRAD3Q86YD5 345 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 MB21D2Q8IYB1 491 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 THNSL1Q8IYQ7 743 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 OR8H3Q8N146 312 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 GUF1Q8N442 669 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 BOLLQ8N9W6 283 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 AGBL3Q8NEM8 1001 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 TSPAN14Q8NG11 270 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 TRPC4APQ8TEL6 797 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PTPMT1Q8WUK0 201 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 MSI2Q96DH6 328 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PPP1R13BQ96KQ4 1090 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 CEP295NLQ96MC4 621 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 RAB3IPQ96QF0 476 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 GFM1Q96RP9 751 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 ACOX2Q99424 681 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 AGAP2Q99490 1192 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 KLHL31Q9H511 634 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 OPA3Q9H6K4 179 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 HINT3Q9NQE9 182 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PFDN4Q9NQP4 134 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 PAG1Q9NWQ8 432 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 CISD1Q9NZ45 108 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 GDE1Q9NZC3 331 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 UBA2Q9UBT2 640 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 ANAPC5Q9UJX4 755 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 GTF3C4Q9UKN8 822 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 BTBD3Q9Y2F9 522 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 TECPR2O15040 1411 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 TNS3Q68CZ2 1445 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 YTHDC2Q9H6S0 1430 aaKnown RBP3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 LAMC1P11047 1609 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 USP32Q8NFA0 1604 aa3.26□□□□□ -1.89
TRAPPC11-205ENST00000506426 SLIT2O94813 1529 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 LNP1A1A4G5 178 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 URADA6NGE7 173 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 MANSC4A6NHS7 340 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 PPP6CO00743 305 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 VCYO14598 125 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 TLX3O43711 291 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 LATS1O95835 1130 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 KLKB1P03952 638 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CHRNB1P11230 501 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 IFNAR1P17181 557 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CHRNB2P17787 502 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 DDX5P17844 614 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 UBA1P22314 1058 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 MCCP23508 829 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 PPP3CCP48454 512 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 MMP14P50281 582 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CCR3P51677 355 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 ARSEP51690 589 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 GPR143P51810 404 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 RAD23BP54727 409 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CSE1LP55060 971 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 INHBCP55103 352 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMF1P82094 1093 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 ECT2LQ008S8 904 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CXCL9Q07325 125 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 GRIK2Q13002 908 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 DLG2Q15700 870 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CEP78Q5JTW2 689 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CST9LP1Q5W188 147 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 PAPD7Q5XG87 772 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 GGNBP1Q5YKI7 109 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 TMEM198Q66K66 360 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 DHRS7BQ6IAN0 325 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 METTL2BQ6P1Q9 378 aaKnown RBP3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF66Q6ZN08 573 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 ZNF788Q6ZQV5 615 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 SLC16A12Q6ZSM3 486 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 DPPA4Q7L190 304 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 TAOK1Q7L7X3 1001 aa3.25□□□□□ -1.89
TRAPPC11-205ENST00000506426 CACNA2D4Q7Z3S7 1137 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms