RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ANXA9O76027 345 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 MTHFD1P11586 935 aaKnown RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 ERCC2P18074 760 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 CXCR4P61073 352 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 EMX2Q04743 252 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 CHRNB3Q05901 458 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 NOGQ13253 232 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 CAPRIN1Q14444 709 aaKnown RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 OTUD3Q5T2D3 398 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 ZNF470Q6ECI4 717 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 TBPL2Q6SJ96 375 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 DNAJC14Q6Y2X3 702 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 ARMCX6Q7L4S7 300 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 RAB44Q7Z6P3 723 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 DSG4Q86SJ6 1040 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 GALNT13Q8IUC8 556 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 MFSD6LQ8IWD5 586 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 TMEM192Q8IY95 271 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 KIAA2013Q8IYS2 634 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 DEFB106AQ8N104 65 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 DNAJC5GQ8N7S2 189 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 KIAA1958Q8N8K9 716 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 OR7G1Q8NGA0 311 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 CAPSLQ8WWF8 208 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 LRCH3Q96II8 777 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 NPY6RQ99463 290 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 OSBPL10Q9BXB5 764 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 TEX13BQ9BXU2 312 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 MMP27Q9H306 513 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 NEK6Q9HC98 313 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 CYP4F12Q9HCS2 524 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 TNFRSF12AQ9NP84 129 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 CHST12Q9NRB3 414 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 COMMD8Q9NX08 183 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 FBXO5Q9UKT4 447 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 EIF3LQ9Y262 564 aaKnown RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 RLFQ13129 1914 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 NEMP2A6NFY4 417 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 G3V2T6 193 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 SLC1A7O00341 560 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 SCO2O43819 266 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 HOXB8P17481 243 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 UBA1P22314 1058 aaKnown RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 PAX3P23760 479 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 SLC1A2P43004 574 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 FADDQ13158 208 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 ZNF460Q14592 562 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 DPY19L1Q2PZI1 675 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 SLC10A6Q3KNW5 377 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 KANK2Q63ZY3 851 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 PLPPR4Q7Z2D5 763 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 IFNLR1Q8IU57 520 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 DENND6AQ8IWF6 608 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 SETD9Q8NE22 299 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 GLMNQ92990 594 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 YIPF6Q96EC8 236 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 PGLYRP2Q96PD5 576 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 DSN1Q9H410 356 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 TOR3AQ9H497 397 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 FBRSL1Q9HCM7 1045 aaKnown RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 DNAJB9Q9UBS3 223 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 ZNF214Q9UL59 606 aaPredicted RBP15.8■□□□□ 0.12
SCLT1-208ENST00000506368 TPRKBQ9Y3C4 175 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 TTC34A8MYJ7 566 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 H0Y626 953 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 PSMD11O00231 422 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 AZIN1O14977 448 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 B4GALT5O43286 388 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 MAN1A2O60476 641 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 TRIM16O95361 564 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 KRT8P05787 483 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 F7P08709 466 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-208ENST00000506368 SLC26A2P50443 739 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 TPI1P60174 286 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 CTBP1Q13363 440 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 SYT6Q5T7P8 510 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-208ENST00000506368 STK32CQ86UX6 486 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 FAM35AQ86V20 835 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 LYSMD2Q8IV50 215 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 SMG8Q8ND04 991 aaKnown RBP15.79■□□□□ 0.12
SCLT1-208ENST00000506368 FBLIM1Q8WUP2 373 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 TWIST2Q8WVJ9 160 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 FAR1Q8WVX9 515 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 C12orf42Q96LP6 360 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 ZNF300Q96RE9 604 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-208ENST00000506368 TBL1YQ9BQ87 522 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 PLEKHA5Q9HAU0 1116 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 CCNB1IP1Q9NPC3 277 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 KLQ9UEF7 1012 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 DNAJC15Q9Y5T4 150 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 MANSC4A6NHS7 340 aaPredicted RBP15.79■□□□□ 0.12
SCLT1-208ENST00000506368 SYCE1LA8MT33 242 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 PDHXO00330 501 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 UBFD1O14562 309 aaKnown RBP15.79■□□□□ 0.12
SCLT1-208ENST00000506368 SLC16A6O15403 523 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 LCP1P13796 627 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 IL7RP16871 459 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 TPH1P17752 444 aa15.79■□□□□ 0.12
SCLT1-208ENST00000506368 KCNA5P22460 613 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms