RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 PTAR1Q7Z6K3 402 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 SDCCAG8Q86SQ7 713 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 CROCCP2Q86T23 111 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 FAM124AQ86V42 546 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 PIANPQ8IYJ0 282 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 RIBC1Q8N443 379 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 UHMK1Q8TAS1 419 aaKnown RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 DCAKDQ8WVC6 231 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 BTN2A2Q8WVV5 523 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.15□□□□□ -1.26
NUP54-204ENST00000506098 ULK4Q96C45 1275 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 AP2M1Q96CW1 435 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 TOE1Q96GM8 510 aaKnown RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 PAFAH2Q99487 392 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 AGAP2Q99490 1192 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 CPNE1Q99829 537 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 RIOK2Q9BVS4 552 aaKnown RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 C1QTNF7Q9BXJ2 289 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 ASB8Q9H765 288 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 ZNF446Q9NWS9 450 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 MARCH4Q9P2E8 410 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 CD84Q9UIB8 345 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 MBD1Q9UIS9 605 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 FBXO5Q9UKT4 447 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 TMPRSS11EQ9UL52 423 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 CNOT6Q9ULM6 557 aaKnown RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 CORO1CQ9ULV4 474 aaPredicted RBP7.15□□□□□ -1.26
NUP54-204ENST00000506098 DMTF1Q9Y222 760 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 HS3ST3A1Q9Y663 406 aa7.15□□□□□ -1.26
NUP54-204ENST00000506098 USP34Q70CQ2 3546 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 METTL12A8MUP2 240 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 GOLGA8KD6RF30 607 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 H0YHG0 523 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 GOLGA8TH3BQL2 631 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 AGPSO00116 658 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 RASGRF2O14827 1237 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PFDN6O15212 129 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A9O60656 530 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 GPR37L1O60883 481 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 CDH16O75309 829 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 FAM155BO75949 473 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 SASH3O75995 380 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 HAUS5O94927 633 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 IGHV4-34P06331 123 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PRSS56P0CW18 603 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A6P19224 532 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 CD9P21926 228 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A1P22309 533 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A4P22310 534 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 HNRNPA2B1P22626 353 aaKnown RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 RPS3P23396 243 aaKnown RBP eCLIP7.14□□□□□ -1.27
NUP54-204ENST00000506098 ACRV1P26436 265 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 CNTFP26441 200 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 CA5AP35218 305 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 SPRP35270 261 aaPredicted RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A3P35503 534 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 UGT1A5P35504 534 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 GP5P40197 560 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PTGER3P43115 390 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 MSH2P43246 934 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 GPR1P46091 355 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 POLD2P49005 469 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PXNP49023 591 aaPredicted RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 SERPINB9P50453 376 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 ZNF844Q08AG5 666 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 DMWDQ09019 674 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 CTBP1Q13363 440 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 ITIH4Q14624 930 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 DBN1Q16643 649 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 SETMARQ53H47 684 aaPredicted RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 TNFAIP8L3Q5GJ75 292 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 LDLRAP1Q5SW96 308 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 RNF187Q5TA31 235 aaPredicted RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 ZNF470Q6ECI4 717 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 ADAMTSL4Q6UY14 1074 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PACS1Q6VY07 963 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 MICALCLQ6ZW33 695 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 LONP2Q86WA8 852 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 ZC3HC1Q86WB0 502 aaKnown RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 SERPINA9Q86WD7 417 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 DENND6AQ8IWF6 608 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 CTAGE3PQ8IX95 158 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PELI3Q8N2H9 469 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 NXPE1Q8N323 547 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 FAM160A2Q8N612 972 aaPredicted RBP7.14□□□□□ -1.27
NUP54-204ENST00000506098 PPM1NQ8N819 430 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 FRMD1Q8N878 549 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 PLA2G15Q8NCC3 412 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 DDHD1Q8NEL9 900 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 OR2W6PQ8NHA6 318 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 FAM174AQ8TBP5 190 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 HEXDCQ8WVB3 486 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 RLN3Q8WXF3 142 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 LPGAT1Q92604 370 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 GLYATL1Q969I3 302 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 BIRC7Q96CA5 298 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 COX14Q96I36 57 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 SPACA7Q96KW9 195 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 TTC1Q99614 292 aa7.14□□□□□ -1.27
NUP54-204ENST00000506098 RBBP8Q99708 897 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms