RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SUOXP51687 545 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 RPS14P62263 151 aaKnown RBP9.3□□□□□ -0.92
TPM3-218ENST00000505010 MRPS21P82921 87 aaKnown RBP9.3□□□□□ -0.92
TPM3-218ENST00000505010 CACNG1Q06432 222 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ELP6Q0PNE2 266 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 CNTN1Q12860 1018 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 PEX6Q13608 980 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ACOX1Q15067 660 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 CCDC6Q16204 474 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 TYSND1Q2T9J0 566 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 FBXO43Q4G163 708 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 AARS2Q5JTZ9 985 aaKnown RBP9.3□□□□□ -0.92
TPM3-218ENST00000505010 EOGTQ5NDL2 527 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 RNF187Q5TA31 235 aaPredicted RBP9.3□□□□□ -0.92
TPM3-218ENST00000505010 KIAA1211LQ6NV74 962 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 CNSTQ6PJW8 725 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 HSD11B1LQ7Z5J1 315 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ZC3HC1Q86WB0 502 aaKnown RBP9.3□□□□□ -0.92
TPM3-218ENST00000505010 SLC41A1Q8IVJ1 513 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 PNPLA1Q8N8W4 532 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ANKRD42Q8N9B4 389 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 RPLP0P6Q8NHW5 317 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 MGARPQ8TDB4 240 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 GANCQ8TET4 914 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 APOPT1Q96IL0 206 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 LOXL4Q96JB6 756 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 ELMO2Q96JJ3 720 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 NDNQ99608 321 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 GPR22Q99680 433 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 HDAC8Q9BY41 377 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 CAB39LQ9H9S4 337 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 FBRSQ9HAH7 460 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 SNX15Q9NRS6 342 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 CD84Q9UIB8 345 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 APPL1Q9UKG1 709 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 SLC39A10Q9ULF5 831 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
TPM3-218ENST00000505010 MTO1Q9Y2Z2 717 aaKnown RBP9.3□□□□□ -0.92
TPM3-218ENST00000505010 FAM47DPA6NHR8 397 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 SRRM3A6NNA2 597 aaPredicted RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 K7ESF4 209 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 COPEO14579 308 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 PFDN6O15212 129 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 RFPL1O75677 317 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 SRP72O76094 671 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 HAUS5O94927 633 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 S1PR4O95977 384 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 ALDOAP04075 364 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 C5AR1P21730 350 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 TYK2P29597 1187 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CCNFP41002 786 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 ETV3P41162 512 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 P2RY2P41231 377 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 LEPRP48357 1165 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 SPINT3P49223 89 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 TTPAP49638 278 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 LIG3P49916 1009 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 COPAP53621 1224 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 SLC12A2P55011 1212 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CBX1P83916 185 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 XIAPP98170 497 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 PTSQ03393 145 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 FOXC1Q12948 553 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 DNAJC3Q13217 504 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CCINQ13939 588 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 LRRC32Q14392 662 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 GAS6Q14393 721 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 USP10Q14694 798 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 CHRNA6Q15825 494 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 ZNF789Q5FWF6 425 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 RBM20Q5T481 1227 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 PIP5KL1Q5T9C9 394 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 ZDHHC20Q5W0Z9 365 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 TIFABQ6ZNK6 161 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 RFLNAQ6ZTI6 216 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 SNX20Q7Z614 316 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CMC1Q7Z7K0 106 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 GALNT7Q86SF2 657 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 PIANPQ8IYJ0 282 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CNPY4Q8N129 248 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CBARPQ8N350 705 aaPredicted RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 HDDC3Q8N4P3 179 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 AADATQ8N5Z0 425 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 GPR26Q8NDV2 337 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 ACVR1CQ8NER5 493 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 MDM1Q8TC05 714 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 ALKBH8Q96BT7 664 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 PLEKHG4BQ96PX9 1271 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 C19orf43Q9BQ61 176 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 MCMBPQ9BTE3 642 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 IQCGQ9H095 443 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 SLC6A17Q9H1V8 727 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 VPS11Q9H270 941 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 ASB8Q9H765 288 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CNOT10Q9H9A5 744 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 IL26Q9NPH9 171 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 RAD18Q9NS91 495 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 INTS10Q9NVR2 710 aaKnown RBP9.29□□□□□ -0.92
TPM3-218ENST00000505010 NKIRAS1Q9NYS0 192 aa9.29□□□□□ -0.92
TPM3-218ENST00000505010 CRLS1Q9UJA2 301 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms