RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ELFN1P0C7U0 828 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 NDUFV2P19404 249 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 ITGALP20701 1170 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 RAB10P61026 200 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 POU4F1Q01851 419 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 ELP6Q0PNE2 266 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 ARHGEF7Q14155 803 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 USP10Q14694 798 aaKnown RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 LRRC14Q15048 493 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 AGERQ15109 404 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 E2F5Q15329 346 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 GPR33Q49SQ1 333 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 HSF5Q4G112 596 aaPredicted RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 RNF187Q5TA31 235 aaPredicted RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 LGSNQ5TDP6 509 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 FAM46CQ5VWP2 391 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 FAM45BPQ6NSW5 357 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 ERAP2Q6P179 960 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 XKR5Q6UX68 686 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 TRMT11Q7Z4G4 463 aaKnown RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 NRSN1Q8IZ57 195 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 TRAM1L1Q8N609 369 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 ARFGAP2Q8N6H7 521 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 OTUD6BQ8N6M0 293 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 GPATCH11Q8N954 259 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 FAM45AQ8TCE6 357 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 ZNF398Q8TD17 642 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 ELMO2Q96JJ3 720 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 MRGPRX1Q96LB2 322 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 UBXN10Q96LJ8 280 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 WRAP53Q9BUR4 548 aaKnown RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 RIOK2Q9BVS4 552 aaKnown RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 TMEM216Q9P0N5 145 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 TXNDC16Q9P2K2 825 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 THEGQ9P2T0 379 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 NDRG2Q9UN36 371 aaKnown RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 OAS3Q9Y6K5 1087 aaKnown RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 EML5Q05BV3 1969 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 TRPM6Q9BX84 2022 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 GOLGA8CPA6NN73 597 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 MAN2B1O00754 1011 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 COPEO14579 308 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 TM9SF1O15321 606 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 SYNCRIPO60506 623 aaKnown RBP10.3□□□□□ -0.76
TPM3-217ENST00000504663 PLIN3O60664 434 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 MMP20O60882 483 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 DNAJC6O75061 913 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 GLRA3O75311 464 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 NIPSNAP2O75323 286 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 RECQL5O94762 991 aaPredicted RBP10.3□□□□□ -0.76
TPM3-217ENST00000504663 ZWINTO95229 277 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 MPOP05164 745 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 PKMP14618 531 aaKnown RBP10.3□□□□□ -0.76
TPM3-217ENST00000504663 GABRG2P18507 467 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 TYK2P29597 1187 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 PTGER3P43115 390 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 TTPAP49638 278 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 CLCN7P51798 805 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 ADPRHP54922 357 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 DPTQ07507 201 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 ITIH4Q14624 930 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 PCLAFQ15004 111 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 CRY1Q16526 586 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 ZNF658BQ4V348 819 aaPredicted RBP10.3□□□□□ -0.76
TPM3-217ENST00000504663 AARS2Q5JTZ9 985 aaKnown RBP10.3□□□□□ -0.76
TPM3-217ENST00000504663 GPRC6AQ5T6X5 926 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 N4BP2L1Q5TBK1 243 aaPredicted RBP10.3□□□□□ -0.76
TPM3-217ENST00000504663 ZDHHC20Q5W0Z9 365 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 SEL1L3Q68CR1 1132 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 C16orf46Q6P387 395 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 FBXL19Q6PCT2 694 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 ATG14Q6ZNE5 492 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 NLRP8Q86W28 1048 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 TMPRSS6Q8IU80 811 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 CNPY4Q8N129 248 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 HDDC3Q8N4P3 179 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 ANKRD42Q8N9B4 389 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 DDHD1Q8NEL9 900 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 CD200R1Q8TD46 325 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 KCTD4Q8WVF5 259 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 CKAP2Q8WWK9 683 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 ZNF317Q96PQ6 595 aaPredicted RBP10.3□□□□□ -0.76
TPM3-217ENST00000504663 FAM111AQ96PZ2 611 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 VPS35Q96QK1 796 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 FOXQ1Q9C009 403 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 FAM83DQ9H4H8 585 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 POPDC3Q9HBV1 291 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 KCNK9Q9NPC2 374 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 ZDHHC3Q9NYG2 299 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 WNT16Q9UBV4 365 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 VWA7Q9Y334 891 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 SLC30A1Q9Y6M5 507 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 LRP4O75096 1905 aa10.3□□□□□ -0.76
TPM3-217ENST00000504663 UBA6A0AVT1 1052 aaPredicted RBP10.29□□□□□ -0.76
TPM3-217ENST00000504663 IQCF5A8MTL0 148 aa10.29□□□□□ -0.76
TPM3-217ENST00000504663 G3V2L1 256 aa10.29□□□□□ -0.76
TPM3-217ENST00000504663 H3BMM5 538 aa10.29□□□□□ -0.76
TPM3-217ENST00000504663 PRMT5O14744 637 aaPredicted RBP10.29□□□□□ -0.76
TPM3-217ENST00000504663 WNT9AO14904 365 aa10.29□□□□□ -0.76
TPM3-217ENST00000504663 IGLV3-19P01714 112 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms