RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 KIFC1Q9BW19 673 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 L2HGDHQ9H9P8 463 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 IL21RQ9HBE5 538 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 SMOXQ9NWM0 555 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 SYBUQ9NX95 663 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 ANAPC5Q9UJX4 755 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 TMPRSS11EQ9UL52 423 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 SOX13Q9UN79 622 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 SLC17A4Q9Y2C5 497 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 FNDC3AQ9Y2H6 1198 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 SNX24Q9Y343 169 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 PCDHGB2Q9Y5G2 931 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 DGKBQ9Y6T7 804 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 DMXL1Q9Y485 3027 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 INPP4BO15327 924 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 PCDHGA12O60330 932 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 GDF9O60383 454 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A9O60656 530 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 SLC25A14O95258 325 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 RASGRP1O95267 797 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 PRAMEF1O95521 474 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 CEACAM5P06731 702 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 IVLP07476 585 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 JUNDP17535 347 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A6P19224 532 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A1P22309 533 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A4P22310 534 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A3P35503 534 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A5P35504 534 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 CCT8P50990 548 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 BLKP51451 505 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 SRP54P61011 504 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 HNRNPKP61978 463 aaKnown RBP eCLIP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 CRADDP78560 199 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 ARHGAP8P85298 464 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 PPARDQ03181 441 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 CALCOCO2Q13137 446 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 CBLBQ13191 982 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 SLC14A1Q13336 389 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 GPR33Q49SQ1 333 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 GLE1Q53GS7 698 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 DNTTIP2Q5QJE6 756 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 PRAMEF14Q5SWL7 426 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 STPG1Q5TH74 334 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 DBX2Q6ZNG2 339 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 PHYKPLQ8IUZ5 450 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 MPP5Q8N3R9 675 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 NOA1Q8NC60 698 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 OR13J1Q8NGT2 312 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 OR1E3Q8WZA6 343 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 SEC14L1Q92503 715 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 SCARF2Q96GP6 870 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 SGSM3Q96HU1 749 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 SIGLEC10Q96LC7 697 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 TBATAQ96M53 351 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 ZNF778Q96MU6 729 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 ASB8Q9H765 288 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A7Q9HAW7 530 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A10Q9HAW8 530 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UGT1A8Q9HAW9 530 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 TRIM39Q9HCM9 518 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 FGF22Q9HCT0 170 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 CHRAC1Q9NRG0 131 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 TM7SF3Q9NS93 570 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 TREX1Q9NSU2 369 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 DNAJC28Q9NX36 388 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 VPS18Q9P253 973 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 KLQ9UEF7 1012 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 KLF15Q9UIH9 416 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 PNMA8BQ9ULN7 279 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 OAS3Q9Y6K5 1087 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 SLC30A1Q9Y6M5 507 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 UNC13CQ8NB66 2214 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 ANKRD12Q6UB98 2062 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 DNAH14Q0VDD8 3507 aa11.8□□□□□ -0.52
PDLIM5-208ENST00000504489 TRBV5-4A0A0C4DH59 114 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 FAM237BA0A1B0GVD1 139 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 PRSS38A1L453 326 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 CCDC78A2IDD5 438 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 CCDC162PA2VCL2 907 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 C4orf47A7E2U8 309 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 GPR89AB7ZAQ6 455 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 H3BM21 787 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 CCL22O00626 93 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 TNFP01375 233 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 FUCA1P04066 466 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 GPR89BP0CG08 455 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 ITGALP20701 1170 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 NMBRP28336 390 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 EPHA8P29322 1005 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 MC4RP32245 332 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 ARSDP51689 593 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 HK3P52790 923 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 SLC7A5Q01650 507 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 CAV1Q03135 178 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 NFATC2Q13469 925 aa11.79□□□□□ -0.52
PDLIM5-208ENST00000504489 DNAJC21Q5F1R6 531 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms