RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ERAP1Q9NZ08 941 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 SPO11Q9Y5K1 396 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 COMMD10Q9Y6G5 202 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 SCN1AP35498 2009 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 A0A0U1RQS6 177 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ASB14A6NK59 587 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 YJEFN3A6XGL0 299 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 FAM155AB1AL88 458 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 EIF3FO00303 357 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 AP3D1O14617 1153 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 HBP1O60381 514 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ABCB7O75027 752 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 GJB3O75712 270 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CCNKO75909 580 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 RECQL5O94762 991 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CST1P01037 141 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CRHBPP24387 322 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 MAGEA12P43365 314 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ACADVLP49748 655 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CLK3P49761 638 aaKnown RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 RPS3AP61247 264 aaKnown RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 PRAMEF19Q5SWL8 479 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ZNF772Q68DY9 489 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 TAF2Q6P1X5 1199 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 C4orf22Q6V702 233 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ZDHHC13Q8IUH4 622 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 MCOLN3Q8TDD5 553 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 KLHL5Q96PQ7 755 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 NODALQ96S42 347 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 ADAMTS10Q9H324 1103 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 PDZD7Q9H5P4 517 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CASS4Q9NQ75 786 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 PLSCR3Q9NRY6 295 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 PAK1IP1Q9NWT1 392 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-208ENST00000504387 SLC30A1Q9Y6M5 507 aa7.58□□□□□ -1.2
NEDD9-208ENST00000504387 CCDC154A6NI56 674 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TRIM64CA6NLI5 447 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 SUPT3HB4E1H0 165 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 G3V2T6 193 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TBC1D4O60343 1298 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 DEAF1O75398 565 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 DAB1O75553 588 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 HSMCR30P0CW71 290 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ARNTP27540 789 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TTKP33981 857 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 NOS2P35228 1153 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 MATKP42679 507 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CLK1P49759 484 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 AGTR2P50052 363 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TKTL1P51854 596 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 GP2P55259 537 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CDKN2DP55273 166 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PHC1P78364 1004 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CREB5Q02930 508 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 INTS11Q5TA45 600 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 AGAP9Q5VTM2 703 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 DESI1Q6ICB0 168 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TMEM207Q6UWW9 146 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PLEKHG7Q6ZR37 379 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 SLC16A12Q6ZSM3 486 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CYS1Q717R9 158 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 LARP4Q71RC2 724 aaKnown RBP eCLIP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PAF1Q8N7H5 531 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CLHC1Q8NHS4 586 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ATL1Q8WXF7 558 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PTERQ96BW5 349 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TTYH2Q9BSA4 534 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 C17orf80Q9BSJ5 609 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 BDH2Q9BUT1 245 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ULBP1Q9BZM6 244 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TKTL2Q9H0I9 626 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 NEK6Q9HC98 313 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 IGSF5Q9NSI5 407 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ADPRHL2Q9NX46 363 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ACTR3BQ9P1U1 418 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 OR12D3Q9UGF7 316 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PTBP2Q9UKA9 531 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PCDHGA11Q9Y5H2 935 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 USP3Q9Y6I4 520 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 ARVCFO00192 962 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 NFKBIEO00221 500 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 MEN1O00255 615 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 SEC14L2O76054 403 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CDK14O94921 469 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 C1RP00736 705 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 CAPNS1P04632 268 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 KRT8P05787 483 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 GSNP06396 782 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 DGKEP52429 567 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TMBIM6P55061 237 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TNFAIP2Q03169 654 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TARBP2Q15633 366 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 SNAP47Q5SQN1 464 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 C6orf141Q5SZD1 244 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TWF2Q6IBS0 349 aaKnown RBP7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PKN3Q6P5Z2 889 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 KIAA0408Q6ZU52 694 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 TFAP2DQ7Z6R9 452 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 LINC00523Q86TU6 105 aa7.57□□□□□ -1.2
NEDD9-208ENST00000504387 PHACTR4Q8IZ21 702 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms