RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ARL5BQ96KC2 179 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 DNAJC1Q96KC8 554 aaKnown RBP2.78□□□□□ -1.97
NEDD4-204ENST00000503468 VAT1Q99536 393 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 LPIN3Q9BQK8 851 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM79Q9BSE2 394 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 ZCWPW1Q9H0M4 648 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 SERHL2Q9H4I8 314 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 C12orf4Q9NQ89 552 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 WASH6PQ9NQA3 447 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 AASDHPPTQ9NRN7 309 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 SLC38A7Q9NVC3 462 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 PAK5Q9P286 719 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 STRIP2Q9ULQ0 834 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 NOSIPQ9Y314 301 aaKnown RBP2.78□□□□□ -1.97
NEDD4-204ENST00000503468 TPRKBQ9Y3C4 175 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 KCNE2Q9Y6J6 123 aa2.78□□□□□ -1.97
NEDD4-204ENST00000503468 HEATR9A2RTY3 570 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NPIPB13A6NJU9 1138 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NPIPB4C9JG80 1138 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LOC110117498-PIK3R3F6TDL0 507 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 H3BSA7 217 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 OGTO15294 1046 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 AVILO75366 819 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SULT1C4O75897 302 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MYO1DO94832 1006 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 FSTL3O95633 263 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PRLP01236 227 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 APOC1P02654 83 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NR3C1P04150 777 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 BPGMP07738 259 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TRIM49P0CI25 452 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TRIM49CP0CI26 452 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 HNRNPLP14866 589 aaKnown RBP eCLIP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 BTF3P20290 206 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 EEF1B2P24534 225 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ABCE1P61221 599 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RPS6P62753 249 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SLC7A9P82251 487 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 FZD5Q13467 585 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PDK1Q15118 436 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PDK2Q15119 407 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TLR1Q15399 786 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 C2orf27AQ580R0 203 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PIK3R6Q5UE93 754 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 UGT3A1Q6NUS8 523 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 BHLHB9Q6PI77 547 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MACC1Q6ZN28 852 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RNF207Q6ZRF8 634 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 EFL1Q7Z2Z2 1120 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 FIBCD1Q8N539 461 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC185Q8N715 623 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 POU5F2Q8N7G0 328 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RHOXF1Q8NHV9 184 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ARRDC2Q8TBH0 407 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RDH11Q8TC12 318 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TRPM4Q8TD43 1214 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TGFBRAP1Q8WUH2 860 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PIK3R3Q92569 461 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RPL3LQ92901 407 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MTERF3Q96E29 417 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC126Q96EE4 140 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MSANTD3Q96H12 275 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF578Q96N58 590 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PANX3Q96QZ0 392 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SRPK1Q96SB4 655 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 NELL2Q99435 816 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ADI1Q9BV57 179 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PACSIN1Q9BY11 444 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM117Q9H0C3 514 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ILKAPQ9H0C8 392 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 LIN7BQ9HAP6 207 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RAVER2Q9HCJ3 691 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MLXIPLQ9NP71 852 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 GABBR1Q9UBS5 961 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 C3orf18Q9UK00 162 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 WASF3Q9UPY6 502 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 MAN2B2Q9Y2E5 1009 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PCDHB12Q9Y5F1 795 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 POTEMA6NI47 508 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 EIF4E1BA6NMX2 242 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 BBIP1A8MTZ0 92 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 CHURC1-FNTBB4DL54 471 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 RAD51BO15315 384 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZW10O43264 779 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 UPP2O95045 317 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 IFNA14P01570 189 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SLC4A1P02730 911 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 KRT19P08727 400 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PTGS2P35354 604 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 PIK3CAP42336 1068 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 QARSP47897 775 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 FMO5P49326 533 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 AP2S1P53680 142 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SNX16P57768 344 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 DAB2P98082 770 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 TCP10Q12799 353 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 KLF10Q13118 480 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 SLC1A5Q15758 541 aa2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ZYXQ15942 572 aaKnown RBP2.77□□□□□ -1.97
NEDD4-204ENST00000503468 ESCO2Q56NI9 601 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms