RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TMEM39BQ9GZU3 492 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 CHMP1AQ9HD42 196 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 MMP25Q9NPA2 562 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 PIH1D3Q9NQM4 214 aaKnown RBP5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 MBNL1Q9NR56 388 aaKnown RBP5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 IL17BQ9UHF5 180 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 TSPYL4Q9UJ04 414 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZMYM2Q9UBW7 1377 aa5.29□□□□□ -1.56
HMGB1P3-201ENST00000502802 TMEM8BA6NDV4 472 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 EIF4E1BA6NMX2 242 aaKnown RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 PSMA7O14818 248 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 SLCO2B1O94956 709 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 KCNK5O95279 499 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 EGFP01133 1207 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 CYP19A1P11511 503 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 HOXC8P31273 242 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 TLX1P31314 330 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 HNRNPH1P31943 449 aaKnown RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 NPY4RP50391 375 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 POLGP54098 1239 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 CDH13P55290 713 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZNF284Q2VY69 593 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 FAM98BQ52LJ0 330 aaKnown RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 SLC10A5Q5PT55 438 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 DCST1Q5T197 706 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 DCAF12L2Q5VW00 463 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 NSUN5P2Q63ZY6 315 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 CAVIN1Q6NZI2 390 aaKnown RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 YTHDF3Q7Z739 585 aaKnown RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 DSELQ8IZU8 1212 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZNF713Q8N859 430 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 CAMKVQ8NCB2 501 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 ADAMTS14Q8WXS8 1223 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 HAUS8Q9BT25 410 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 PRSS22Q9GZN4 317 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 ISCUQ9H1K1 167 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 C2orf40Q9H1Z8 148 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 R3HDMLQ9H3Y0 253 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 RIOX1Q9H6W3 641 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 ADARB2Q9NS39 739 aaKnown RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 TRMT1Q9NXH9 659 aaKnown RBP5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 TAS2R14Q9NYV8 317 aa5.28□□□□□ -1.56
HMGB1P3-201ENST00000502802 ZNF541Q9H0D2 1346 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 CGB1A6NKQ9 187 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 MS4A18H0YCH9 400 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 J3KR12 359 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 ITM2AO43736 263 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 PFKFB1P16118 471 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 NR2F2P24468 414 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 KRT2P35908 639 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 ACVRL1P37023 503 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 ALDH7A1P49419 539 aaKnown RBP5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 CSNK2A1P68400 391 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 MAD2L1Q13257 205 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 MYLK3Q32MK0 819 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 SUPT20HL1Q3ZLR7 823 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 PPP6R3Q5H9R7 873 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 WASHC2DQ5SRD0 308 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 PAPD4Q6PIY7 484 aaKnown RBP5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 TPRG1Q6ZUI0 275 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZNF367Q7RTV3 350 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 TRAPPC11Q7Z392 1133 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 ADCK2Q7Z695 626 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 FBXO39Q8N4B4 442 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 CSNK2A3Q8NEV1 391 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 GDAP1Q8TB36 358 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 TAS1R2Q8TE23 839 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 INPP5DQ92835 1189 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 SPACA9Q96E40 222 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 APOLD1Q96LR9 279 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 FNBP1Q96RU3 617 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 TRMOQ9BU70 441 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 ANKZF1Q9H8Y5 726 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 CNOT10Q9H9A5 744 aaKnown RBP5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 SEBOXQ9HB31 216 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 CNGB3Q9NQW8 809 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 CDC14AQ9UNH5 594 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 PAM16Q9Y3D7 125 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 SQORQ9Y6N5 450 aa5.27□□□□□ -1.57
HMGB1P3-201ENST00000502802 TRAV34A0A0B4J273 112 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 TMEM272A0A1B0GTI8 110 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 ARHGEF37A1IGU5 675 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 KCNU1A8MYU2 1149 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 B4DGG1 531 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 B8ZZF3 427 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 HSPA12AO43301 675 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 PLPP2O43688 288 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZIC3O60481 467 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 SYNCRIPO60506 623 aaKnown RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 PRAMEF11O60813 436 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 CREG1O75629 220 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 NDUFB8O95169 186 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 VNN2O95498 520 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 PENKP01210 267 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 LINGO3P0C6S8 592 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 ARSBP15848 533 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 SP100P23497 879 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 DNASE1P24855 282 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 HOXC13P31276 330 aa5.26□□□□□ -1.57
HMGB1P3-201ENST00000502802 ZP1P60852 638 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms