RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GATAD2AQ86YP4 633 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 PYROXD2Q8N2H3 581 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 TRUB1Q8WWH5 349 aaKnown RBP17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 LRRC3Q9BY71 257 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 CORO2BQ9UQ03 480 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 BTN3A3O00478 584 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 ALDH4A1P30038 563 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 GSTM5P46439 218 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 FOXM1Q08050 763 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 DCLRE1AQ6PJP8 1040 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 UGT2A3Q6UWM9 527 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 CHSY3Q70JA7 882 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 AHSA2Q719I0 299 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 CAMKK1Q8N5S9 505 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 NELL1Q92832 810 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 LRRC58Q96CX6 371 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 SENP8Q96LD8 212 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 ZNF624Q9P2J8 865 aaPredicted RBP17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 FBXL21Q9UKT6 434 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 MYH7P12883 1935 aa17.13■□□□□ 0.33
HMGXB3-201ENST00000502717 M0QX08 132 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 ABCB7O75027 752 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 RHOAP61586 193 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 SPATS1Q496A3 300 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 WSCD1Q658N2 575 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 ESRP1Q6NXG1 681 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 PDP1Q9P0J1 537 aaPredicted RBP17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 TIMM22Q9Y584 194 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 KRT87PA6NCN2 255 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 RFXANKO14593 260 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 FFAR3O14843 346 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 GPR42O15529 346 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 DLX3O60479 287 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 ZNF286BP0CG31 522 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 UROSP10746 265 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 SCN1BQ07699 218 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 EPHX4Q8IUS5 362 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 COLGALT2Q8IYK4 626 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 HERPUD2Q9BSE4 406 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 FZD1Q9UP38 647 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 MFHAS1Q9Y4C4 1052 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 CBX4O00257 560 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 C7P10643 843 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 CYP2A7P20853 494 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 TIE1P35590 1138 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 PHC1P78364 1004 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 ZNF460Q14592 562 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 ZNF284Q2VY69 593 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 PLEKHG6Q3KR16 790 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 PABPC1LQ4VXU2 614 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 MLPHQ9BV36 600 aaPredicted RBP17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 MRPL9Q9BYD2 267 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 SP140LQ9H930 580 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 CAPN14A8MX76 684 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 EFCAB9A8MZ26 197 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 FGF1P05230 155 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 MTHFD1P11586 935 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 HPCAL1P37235 193 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 RAB39AQ14964 217 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 OVOS1Q6IE37 1185 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 SLC39A4Q6P5W5 647 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 DENND6AQ8IWF6 608 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 OR5K1Q8NHB7 308 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 FBXO27Q8NI29 283 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 FEM1AQ9BSK4 669 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 NUSAP1Q9BXS6 441 aaKnown RBP17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 EHD1Q9H4M9 534 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 KCNK13Q9HB14 408 aa17.12■□□□□ 0.33
HMGXB3-201ENST00000502717 SLC16A1P53985 500 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 AP5B1Q2VPB7 878 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 FAM131AQ6UXB0 335 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 MTMR14Q8NCE2 650 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 ZNF347Q96SE7 839 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 KRCC1Q9NPI7 259 aaPredicted RBP17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 FZD10Q9ULW2 581 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 ANXA5P08758 320 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 CCNCP24863 283 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 BORAQ6PGQ7 559 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 USP43Q70EL4 1123 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 TCAIMQ8N3R3 496 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 MAFBQ9Y5Q3 323 aaPredicted RBP17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 STAU1O95793 577 aaKnown RBP17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 CDK4P11802 303 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 IMPDH1P20839 514 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 CEACAM7Q14002 265 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 CES5AQ6NT32 575 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 SLC22A16Q86VW1 577 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 WDR36Q8NI36 951 aaKnown RBP17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 HAPLN3Q96S86 360 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 STOML2Q9UJZ1 356 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 MYH3P11055 1940 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 IRF1P10914 325 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 BDNFP23560 247 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 ADORA2AP29274 412 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 CYS1Q717R9 158 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 ALDH16A1Q8IZ83 802 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 TBC1D19Q8N5T2 526 aa17.11■□□□□ 0.33
HMGXB3-201ENST00000502717 MTFMTQ96DP5 389 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms