RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SNX9Q9Y5X1 595 aa4.35□□□□□ -1.71
HMGB1P21-201ENST00000502313 AOX1Q06278 1338 aa4.35□□□□□ -1.71
HMGB1P21-201ENST00000502313 C4AP0C0L4 1744 aa4.35□□□□□ -1.71
HMGB1P21-201ENST00000502313 CYP2D7A0A087X1C5 515 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 A0A0A6YYC8 382 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CTAGE15A4D2H0 777 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 EME2A4GXA9 379 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 C5orf51A6NDU8 294 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 WIPF3A6NGB9 483 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 LRRC72A6NJI9 287 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 LACTBL1A8MY62 500 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM86B1E9PN63 330 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 I3L1I5 382 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF213O14771 459 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 IFIT3O14879 490 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ST8SIA3O43173 380 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 B4GALT3O60512 393 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 RAD17O75943 681 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 TRUB2O95900 331 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CSF1RP07333 972 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CHRM4P08173 479 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 INHBBP09529 407 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAM86B2P0C5J1 330 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CTAGE8P0CG41 777 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CCDC192P0DO97 292 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 MMP9P14780 707 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ITGALP20701 1170 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 PTPN9P43378 593 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CLK3P49761 638 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CLCN3P51790 818 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CHN2P52757 468 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 SNU13P55769 128 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 LOXL3P58215 753 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 TIAL1Q01085 375 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 GCNT1Q02742 428 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 MZT1Q08AG7 82 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 MESP2Q0VG99 397 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 GRSF1Q12849 480 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CHIT1Q13231 466 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLC39A6Q13433 755 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 SNX1Q13596 522 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CBFBQ13951 182 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 DLG2Q15700 870 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 AASDHQ4L235 1098 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 HSP90B2PQ58FF3 399 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 DNTTIP2Q5QJE6 756 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CYP4A22Q5TCH4 519 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 SFMBT2Q5VUG0 894 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 SHEQ5VZ18 495 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 KRT79Q5XKE5 535 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ATG9BQ674R7 924 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 SLFN13Q68D06 897 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 GRHL2Q6ISB3 625 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 RGS7BPQ6MZT1 257 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 TAPT1Q6NXT6 567 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 PTCHD4Q6ZW05 846 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ARMC9Q7Z3E5 817 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 TADA2BQ86TJ2 420 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 TLK2Q86UE8 772 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CTAGE6Q86UF2 777 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 TAX1BP1Q86VP1 789 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CTAGE4Q8IX94 777 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 DNAJC10Q8IXB1 793 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CDH26Q8IXH8 852 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ELOA2Q8IYF1 753 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 GPR135Q8IZ08 494 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 BHLHE22Q8NFJ8 381 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 PSMA8Q8TAA3 256 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 AGR3Q8TD06 166 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ROBO4Q8WZ75 1007 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 PABPC5Q96DU9 382 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ALG14Q96F25 216 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 FAR2Q96K12 515 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ADAD1Q96M93 576 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 TRIB1Q96RU8 372 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 PNKPQ96T60 521 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 THUMPD2Q9BTF0 503 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 NPLQ9BXD5 320 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 PUS3Q9BZE2 481 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 ZNF350Q9GZX5 532 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 PDZD7Q9H5P4 517 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CNOT10Q9H9A5 744 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 CRLF2Q9HC73 371 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 RANGRFQ9HD47 186 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 NGBQ9NPG2 151 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 SERINC1Q9NRX5 453 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 DNAJC11Q9NVH1 559 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 COX16Q9P0S2 106 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 TRPC4Q9UBN4 977 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 LEF1Q9UJU2 399 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 FBXW2Q9UKT8 454 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 A4GNTQ9UNA3 340 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 UBE2J1Q9Y385 318 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 COPG1Q9Y678 874 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 USP42Q9H9J4 1324 aaKnown RBP4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 C10orf71Q711Q0 1435 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 KDM3BQ7LBC6 1761 aa4.34□□□□□ -1.71
HMGB1P21-201ENST00000502313 VIRMAQ69YN4 1812 aaKnown RBP4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 PXDNLA1KZ92 1463 aa4.33□□□□□ -1.72
HMGB1P21-201ENST00000502313 SNED1Q8TER0 1413 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms