RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ZDHHC18Q9NUE0 388 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 CACNG5Q9UF02 275 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.52□□□□□ -1.857e-44■■■■■ 137.4
SMC4-227ENST00000497984 AGRNO00468 2067 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 A0A0G2JLW4 131 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 C5orf60A6NFR6 353 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 SPINT2O43291 252 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 SEC14L5O43304 696 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 TSHBP01222 138 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 HOXB5P09067 269 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 IRF1P10914 325 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 ZNF23P17027 643 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 AMPHP49418 695 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 TRPC3Q13507 836 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 ZNF239Q16600 458 aaKnown RBP3.51□□□□□ -1.85
SMC4-227ENST00000497984 BAK1Q16611 211 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 DECR1Q16698 335 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 TMEM95Q3KNT9 176 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 ZNF790Q6PG37 636 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 HAPLN4Q86UW8 402 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 ZNF354CQ86Y25 554 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 CPXCR1Q8N123 301 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 ADSSL1Q8N142 457 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 MORC4Q8TE76 937 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 PABPC5Q96DU9 382 aaKnown RBP3.51□□□□□ -1.85
SMC4-227ENST00000497984 FGF22Q9HCT0 170 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 ADPRHL2Q9NX46 363 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 MPP6Q9NZW5 540 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 RASAL2Q9UJF2 1139 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 SLC13A4Q9UKG4 626 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 LRRFIP2Q9Y608 721 aaKnown RBP3.51□□□□□ -1.85
SMC4-227ENST00000497984 DISP3Q9P2K9 1392 aa3.51□□□□□ -1.85
SMC4-227ENST00000497984 NOTCH2Q04721 2471 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 COL5A2P05997 1499 aaPredicted RBP3.5□□□□□ -1.85
SMC4-227ENST00000497984 IGKV6D-41A0A0C4DH26 115 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 NCAM2O15394 837 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 SORBS2O94875 1100 aaKnown RBP3.5□□□□□ -1.85
SMC4-227ENST00000497984 COX7A2P14406 83 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 PPM1FP49593 454 aaPredicted RBP3.5□□□□□ -1.85
SMC4-227ENST00000497984 CLDN20P56880 219 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 PLIN5Q00G26 463 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 TDGQ13569 410 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 PRICKLE4Q2TBC4 344 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 C18orf63Q68DL7 685 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 SMAP1Q8IYB5 467 aaPredicted RBP3.5□□□□□ -1.85
SMC4-227ENST00000497984 MYRIPQ8NFW9 859 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 FAM222BQ8WU58 562 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 IFIH1Q9BYX4 1025 aaKnown RBP3.5□□□□□ -1.85
SMC4-227ENST00000497984 RPS10P5Q9NQ39 176 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 TMEM181Q9P2C4 612 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 MARCH4Q9P2E8 410 aaPredicted RBP3.5□□□□□ -1.85
SMC4-227ENST00000497984 KLHL20Q9Y2M5 609 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 SCINQ9Y6U3 715 aa3.5□□□□□ -1.85
SMC4-227ENST00000497984 A0A1W2PPI3 338 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 TTC36A6NLP5 189 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 H7C423 109 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 TSPAN4O14817 238 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 CAVIN2O95810 425 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 CSF2RAP15509 400 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 HOXA13P31271 388 aaPredicted RBP3.49□□□□□ -1.85
SMC4-227ENST00000497984 MAP2K2P36507 400 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 NR2C2P49116 596 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 MRPS5P82675 430 aaKnown RBP3.49□□□□□ -1.85
SMC4-227ENST00000497984 KIR2DS3Q14952 304 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 GPR68Q15743 365 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 TCTE1Q5JU00 501 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 FAAP20Q6NZ36 180 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 SLC22A25Q6T423 547 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 PIWIL4Q7Z3Z4 852 aaKnown RBP3.49□□□□□ -1.85
SMC4-227ENST00000497984 MAP7D3Q8IWC1 876 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 RBM15BQ8NDT2 890 aaKnown RBP3.49□□□□□ -1.85
SMC4-227ENST00000497984 DDHD1Q8NEL9 900 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 SLC44A1Q8WWI5 657 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 EIF2AK1Q9BQI3 630 aaKnown RBP3.49□□□□□ -1.85
SMC4-227ENST00000497984 H2AFJQ9BTM1 129 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 BICC1Q9H694 974 aaKnown RBP3.49□□□□□ -1.85
SMC4-227ENST00000497984 WASH6PQ9NQA3 447 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 RRN3Q9NYV6 651 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 PDP2Q9P2J9 529 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 A4GNTQ9UNA3 340 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 CEPT1Q9Y6K0 416 aa3.49□□□□□ -1.85
SMC4-227ENST00000497984 UTYO14607 1347 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 RRN3P2A6NIE6 340 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 VCYO14598 125 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 TNPO2O14787 897 aaKnown RBP3.48□□□□□ -1.85
SMC4-227ENST00000497984 HNRNPA1P09651 372 aaKnown RBP eCLIP3.48□□□□□ -1.85
SMC4-227ENST00000497984 DPEP1P16444 411 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 APOBEC1P41238 236 aaKnown RBP3.48□□□□□ -1.85
SMC4-227ENST00000497984 UFM1P61960 85 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 RPP30P78346 268 aaKnown RBP3.48□□□□□ -1.85
SMC4-227ENST00000497984 KRTAP13-3Q3SY46 172 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 GPR180Q86V85 440 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 SMC5Q8IY18 1101 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 ANKRD52Q8NB46 1076 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 ZBTB10Q96DT7 871 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 PPP1R13BQ96KQ4 1090 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 VGLL1Q99990 258 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 BRF2Q9HAW0 419 aa3.48□□□□□ -1.85
SMC4-227ENST00000497984 ACSS1Q9NUB1 689 aaPredicted RBP3.48□□□□□ -1.85
SMC4-227ENST00000497984 TCP11L1Q9NUJ3 509 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms