RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, human

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3GAP1-206	ENST00000497080	EIF3B	P55884	814 aa	Known RBP	4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	OLIG2	Q13516	323 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	DCTN2	Q13561	401 aa	Known RBP	4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	MYLK3	Q32MK0	819 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	WDR38	Q5JTN6	314 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	TSSK4	Q6SA08	328 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	GSTA5	Q7RTV2	222 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	ZNF248	Q8NDW4	579 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	TM9SF4	Q92544	642 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	C17orf77	Q96MU5	243 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	NISCH	Q9Y2I1	1504 aa		4.1	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	IGKV3D-15	A0A087WSY6	115 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	C1orf226	A1L170	272 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	ERI2	A8K979	691 aa	Known RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	EIF3CL	B5ME19	914 aa	Known RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	FAM90A26	D6RGX4	464 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	KCNN4	O15554	427 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	PRKN	O60260	465 aa	Predicted RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	NKX2-2	O95096	273 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	UGT1A1	P22309	533 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	AHR	P35869	848 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	ARL1	P40616	181 aa	Predicted RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	UBA7	P41226	1012 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	DRG2	P55039	364 aa	Known RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	MAD2L1	Q13257	205 aa	Predicted RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	ZNF772	Q68DY9	489 aa	Predicted RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	CDC73	Q6P1J9	531 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	RRNAD1	Q96FB5	475 aa	Known RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	TMEM68	Q96MH6	324 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	NR1H4	Q96RI1	486 aa	Predicted RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	FSD1	Q9BTV5	496 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	PAIP1	Q9H074	479 aa	Known RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	CNOT8	Q9UFF9	292 aa	Known RBP	4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	ARHGAP26	Q9UNA1	814 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	KCNK7	Q9Y2U2	307 aa		4.09	□□□□□ -1.75
RAB3GAP1-206	ENST00000497080	CIDEA	O60543	219 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	BAG4	O95429	457 aa	Known RBP	4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	XBP1	P17861	261 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	CHRNB4	P30926	498 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	HOXC9	P31274	260 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	HARS2	P49590	506 aa	Known RBP	4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	KRT71	Q3SY84	523 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	PRAG1	Q86YV5	1406 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	CNTROB	Q8N137	903 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ESX1	Q8N693	406 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ADAD2	Q8NCV1	583 aa	Known RBP	4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	FCAMR	Q8WWV6	532 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	DNAAF4	Q8WXU2	420 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	PHF21A	Q96BD5	680 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	SAGE1	Q9NXZ1	904 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ABI3	Q9P2A4	366 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	OR14J1	Q9UGF5	321 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	GJD2	Q9UKL4	321 aa		4.08	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	OR5K3	A6NET4	321 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	C5orf60	A6NFR6	353 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	KCNK5	O95279	499 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	MLYCD	O95822	493 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	CSF2RA	P15509	400 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ZNF23	P17027	643 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	UBA1	P22314	1058 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	EPHA8	P29322	1005 aa	Predicted RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	CDC16	Q13042	620 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	FRG1	Q14331	258 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	CDON	Q4KMG0	1287 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	KRTCAP3	Q53RY4	240 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	PAPD4	Q6PIY7	484 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	C15orf39	Q6ZRI6	1047 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	PLEKHM3	Q6ZWE6	761 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	TRPT1	Q86TN4	253 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	HEATR4	Q86WZ0	1026 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	RBM15B	Q8NDT2	890 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	TRIM58	Q8NG06	486 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	UTP15	Q8TED0	518 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	SMC6	Q96SB8	1091 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	RANBP17	Q9H2T7	1088 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	SLC13A4	Q9UKG4	626 aa		4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	LRRFIP2	Q9Y608	721 aa	Known RBP	4.07	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	KDM3A	Q9Y4C1	1321 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080		A0A1W2PP11	408 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	HHLA1	C9JL84	531 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	JRK	O75564	520 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	CD48	P09326	243 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ERVK-10	P10266	1014 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	UBL4A	P11441	157 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	GNB1	P62873	340 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ACVR2B	Q13705	512 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	DHX8	Q14562	1220 aa	Known RBP	4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	TECRL	Q5HYJ1	363 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	INO80C	Q6PI98	192 aa	Predicted RBP	4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ZNF497	Q6ZNH5	498 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ANO5	Q75V66	913 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ATG9A	Q7Z3C6	839 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	MYPOP	Q86VE0	399 aa	Predicted RBP	4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	ARMC8	Q8IUR7	673 aa		4.06	□□□□□ -1.76
RAB3GAP1-206	ENST00000497080	CPXCR1	Q8N123	301 aa		4.06	□□□□□ -1.76

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