RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 MATN2O00339 956 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 TRIM13O60858 407 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ATG13O75143 517 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 INMTO95050 263 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 BMP15O95972 392 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CHEK2O96017 543 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 SERPINF2P08697 491 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 IDEP14735 1019 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 WARSP23381 471 aaKnown RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 RPL13P26373 211 aaKnown RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 SLC5A2P31639 672 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 EIF2DP41214 584 aaKnown RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 RAD52P43351 418 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 IFNAR2P48551 515 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 BCAT1P54687 386 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CLRN1P58418 232 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 NOP14P78316 857 aaKnown RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 SLC7A9P82251 487 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 TFAMQ00059 246 aaKnown RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 KDSRQ06136 332 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CCDC173Q0VFZ6 552 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 RESTQ13127 1097 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 SLC12A1Q13621 1099 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 LRP8Q14114 963 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 KCNB1Q14721 858 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 RABEP1Q15276 862 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 SMAD1Q15797 465 aaKnown RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 BMT2Q1RMZ1 405 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 BTBD16Q32M84 506 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ZNF750Q32MQ0 723 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 USP39Q53GS9 565 aaKnown RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 ARHGAP40Q5TG30 622 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 FAXCQ5TGI0 409 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 FAM205BPQ63HN1 556 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 MCTP1Q6DN14 999 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 DHRS13Q6UX07 377 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CLEC18BQ6UXF7 455 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 USP30Q70CQ3 517 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ZNF720Q7Z2F6 126 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 GALNT5Q7Z7M9 940 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ATG4DQ86TL0 474 aaPredicted RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 METTL23Q86XA0 190 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CBWD2Q8IUF1 395 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CCDC117Q8IWD4 279 aaPredicted RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 DCP1BQ8IZD4 617 aaKnown RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 ALLCQ8N6M5 410 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 IL17RCQ8NAC3 791 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CLEC18CQ8NCF0 446 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 OR6Y1Q8NGX8 325 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 POMGNT1Q8WZA1 660 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ST8SIA4Q92187 359 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 MBD6Q96DN6 1003 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CALML4Q96GE6 196 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 PPP1R9BQ96SB3 815 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CYP2S1Q96SQ9 504 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 SYT15Q9BQS2 421 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 SGPP1Q9BX95 441 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 TLR10Q9BXR5 811 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 TRIM9Q9C026 710 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 XYLT2Q9H1B5 865 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 VPS16Q9H269 839 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 DPEP3Q9H4B8 488 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 PRDM13Q9H4Q3 707 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 PDE11AQ9HCR9 933 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 PREBQ9HCU5 417 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 TRPC7Q9HCX4 862 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ZFP64Q9NPA5 681 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 CD93Q9NPY3 652 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 SIRT5Q9NXA8 310 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ADAM29Q9UKF5 820 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 GTF3C4Q9UKN8 822 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.41□□□□□ -1.7
VPS52-222ENST00000495981 SNX9Q9Y5X1 595 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 SLCO1B1Q9Y6L6 691 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 HIVEP1P15822 2718 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 TMEM131Q92545 1883 aa4.41□□□□□ -1.7
VPS52-222ENST00000495981 PI4KAP42356 2102 aa4.4□□□□□ -1.7
VPS52-222ENST00000495981 A0A1W2PQF6 199 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 FAM92AA1XBS5 289 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 GOLGA8IPA6NC78 632 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 GOLGA8JA6NMD2 632 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 ENO4A6NNW6 628 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 F8VP50 259 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 TMCC2O75069 709 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 GCNT3O95395 438 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 NFATC1O95644 943 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 ZSCAN22P10073 491 aaPredicted RBP4.4□□□□□ -1.71
VPS52-222ENST00000495981 GAP43P17677 238 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 TPH1P17752 444 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 LMO2P25791 158 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 HOXD12P35452 270 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 UBA7P41226 1012 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 PGFP49763 221 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 ATXN3P54252 364 aaPredicted RBP4.4□□□□□ -1.71
VPS52-222ENST00000495981 CASP6P55212 293 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 RIPPLY3P57055 190 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 RAP2BP61225 183 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 RPL10AP62906 217 aaKnown RBP4.4□□□□□ -1.71
VPS52-222ENST00000495981 MXRA7P84157 204 aa4.4□□□□□ -1.71
VPS52-222ENST00000495981 MYL7Q01449 175 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms