RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 PDZD3Q86UT5 571 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TRIM69Q86WT6 500 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SLC25A41Q8N5S1 370 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 LYSMD1Q96S90 227 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 APOL2Q9BQE5 337 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TRIM51Q9BSJ1 452 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CARD6Q9BX69 1037 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DUSP15Q9H1R2 295 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 C6orf106Q9H6K1 298 aaPredicted RBP10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 L2HGDHQ9H9P8 463 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MAGEE1Q9HCI5 957 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 HACD3Q9P035 362 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 GGT7Q9UJ14 662 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SCN8AQ9UQD0 1980 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DOCK9Q9BZ29 2069 aa10.11□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 C1orf232A0A0U1RR37 186 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 A0A1W2PQU0 124 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MEI4A8MW99 385 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 EFCAB8A8MWE9 144 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 A8MX80 341 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 AP3B1O00203 1094 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PSMD11O00231 422 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DNALI1O14645 258 aaPredicted RBP10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 NDC80O14777 642 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RAD51CO43502 376 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TM7SF2O76062 418 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RHOBTB1O94844 696 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 FSBPO95073 299 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MAGEA6P43360 314 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 LIG3P49916 1009 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CCR5P51681 352 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TERF1P54274 439 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PPP2CBP62714 309 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PPP2CAP67775 309 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SEMG2Q02383 582 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CDH17Q12864 832 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RALGDSQ12967 914 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 OLIG2Q13516 323 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SIM2Q14190 667 aaPredicted RBP10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 KCNJ11Q14654 390 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PLK5Q496M5 336 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PMS2CLQ68D20 193 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CRTC1Q6UUV9 634 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 LIPIQ6XZB0 460 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 HORMAD1Q86X24 394 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SULF2Q8IWU5 870 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PPIL6Q8IXY8 311 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TMEFF1Q8IYR6 380 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MMGT1Q8N4V1 131 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DNAAF3Q8N9W5 541 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CPT1BQ92523 772 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ZC3H10Q96K80 434 aaKnown RBP10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 HSPA12BQ96MM6 686 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 WRAP53Q9BUR4 548 aaKnown RBP10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RAB17Q9H0T7 212 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TRABDQ9H4I3 376 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ARNT2Q9HBZ2 717 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ZFR2Q9UPR6 939 aaKnown RBP10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 UTP11Q9Y3A2 253 aaKnown RBP10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ZNF711Q9Y462 761 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 R4GN57 208 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ABCA7Q8IZY2 2146 aa10.1□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ZNF106Q9H2Y7 1883 aaKnown RBP10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 IGLON5A6NGN9 336 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 LATO43561 262 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 HEXIM1O94992 359 aaKnown RBP10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CLDN7O95471 211 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 IGHV4-34P06331 123 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PIRTP0C851 137 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 C6P13671 934 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 LHCGRP22888 699 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 MAT2AP31153 395 aaKnown RBP10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 NUDT1P36639 197 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CD96P40200 585 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DHPSP49366 369 aaPredicted RBP10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SGCGQ13326 291 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PTPRRQ15256 657 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 CNGA3Q16281 694 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ZNF284Q2VY69 593 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SETMARQ53H47 684 aaPredicted RBP10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 RNASEH2BQ5TBB1 312 aaKnown RBP10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 IZUMO3Q5VZ72 239 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SEL1L3Q68CR1 1132 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 LRRC66Q68CR7 880 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DENND2CQ68D51 928 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DENND5AQ6IQ26 1287 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 PRR23BQ6ZRT6 265 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 GLT6D1Q7Z4J2 308 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 TSPAN33Q86UF1 283 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 HOOK3Q86VS8 718 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SLC41A1Q8IVJ1 513 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 BBOF1Q8ND07 529 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 OR52K1Q8NGK4 314 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 BLOC1S5Q8TDH9 187 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SNX19Q92543 992 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 ATOH1Q92858 354 aaPredicted RBP10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 BIRC7Q96CA5 298 aa10.09□□□□□ -0.79
RAB11FIP3-211ENST00000495663 SNF8Q96H20 258 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms