RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TRIM7Q9C029 511 aa14.09□□□□□ -0.15
VARS-228ENST00000495010 OSGEPL1Q9H4B0 414 aa14.09□□□□□ -0.15
VARS-228ENST00000495010 MRPL47Q9HD33 250 aaKnown RBP14.09□□□□□ -0.15
VARS-228ENST00000495010 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.09□□□□□ -0.15
VARS-228ENST00000495010 SIDT1Q9NXL6 827 aaKnown RBP14.09□□□□□ -0.15
VARS-228ENST00000495010 PKD2L2Q9NZM6 624 aa14.09□□□□□ -0.15
VARS-228ENST00000495010 MYO1AQ9UBC5 1043 aa14.09□□□□□ -0.15
VARS-228ENST00000495010 PLEKHB1Q9UF11 243 aaPredicted RBP14.09□□□□□ -0.15
VARS-228ENST00000495010 LNPEPQ9UIQ6 1025 aa14.09□□□□□ -0.15
VARS-228ENST00000495010 TLK1Q9UKI8 766 aa14.09□□□□□ -0.15
VARS-228ENST00000495010 CHKBQ9Y259 395 aa14.09□□□□□ -0.15
VARS-228ENST00000495010 OAS3Q9Y6K5 1087 aaKnown RBP14.09□□□□□ -0.15
VARS-228ENST00000495010 MN1Q10571 1320 aaPredicted RBP14.09□□□□□ -0.15
VARS-228ENST00000495010 NBASA2RRP1 2371 aa14.09□□□□□ -0.15
VARS-228ENST00000495010 PIPSLA2A3N6 862 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 K7EM74 188 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 UBXN7O94888 489 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 VIPP01282 170 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 MT-ND3P03897 115 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 ZNF28P17035 718 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 TYRP1P17643 537 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 CASP14P31944 242 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 GFERP55789 205 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 KRT81Q14533 505 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 IRF2BP2Q7Z5L9 587 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 LPCAT1Q8NF37 534 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 TRIM11Q96F44 468 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 FAM83DQ9H4H8 585 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 KLC4Q9NSK0 619 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 PADI1Q9ULC6 663 aa14.08□□□□□ -0.16
VARS-228ENST00000495010 PCYT1BQ9Y5K3 369 aaPredicted RBP14.08□□□□□ -0.16
VARS-228ENST00000495010 C1orf232A0A0U1RR37 186 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 A6NCN8 305 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 TOX3O15405 576 aaPredicted RBP14.07□□□□□ -0.16
VARS-228ENST00000495010 NUAK1O60285 661 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 CREG1O75629 220 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 MTA2O94776 668 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 C9P02748 559 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 GNLYP22749 145 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 IL1R2P27930 398 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 ZNF165P49910 485 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 PMS2P54278 862 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 DSC2Q02487 901 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 ASIC2Q16515 512 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 ANKRD20A8PQ5CZ79 823 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 CCDC122Q5T0U0 273 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 TIGD7Q6NT04 549 aaPredicted RBP14.07□□□□□ -0.16
VARS-228ENST00000495010 TMEM26Q6ZUK4 368 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 TEX26Q8N6G2 289 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 GALNT11Q8NCW6 608 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 CPT1CQ8TCG5 803 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 PLEKHG4BQ96PX9 1271 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 TDRD1Q9BXT4 1180 aaKnown RBP14.07□□□□□ -0.16
VARS-228ENST00000495010 CARD9Q9H257 536 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 UCK1Q9HA47 277 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 PCDH9Q9HC56 1237 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 CNOT6Q9ULM6 557 aaKnown RBP14.07□□□□□ -0.16
VARS-228ENST00000495010 MYO6Q9UM54 1294 aa14.07□□□□□ -0.16
VARS-228ENST00000495010 PDZK1P1A8MUH7 402 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 SPAG6O75602 509 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 FURINP09958 794 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 MYBL1P10243 752 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 RARAP10276 462 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 GZMAP12544 262 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 XRCC1P18887 633 aaPredicted RBP14.06□□□□□ -0.16
VARS-228ENST00000495010 GARSP41250 739 aaKnown RBP14.06□□□□□ -0.16
VARS-228ENST00000495010 UQCRFS1P47985 274 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 SPINT3P49223 89 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 RPL26P61254 145 aaKnown RBP14.06□□□□□ -0.16
VARS-228ENST00000495010 SH3BP2P78314 561 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 MYL5Q02045 173 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 DNASE1L3Q13609 305 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 INSCQ1MX18 579 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 TDRD12Q587J7 1177 aaKnown RBP14.06□□□□□ -0.16
VARS-228ENST00000495010 HENMT1Q5T8I9 393 aaKnown RBP14.06□□□□□ -0.16
VARS-228ENST00000495010 CACHD1Q5VU97 1274 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 HIST2H2BCQ6DN03 193 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 TMEM135Q86UB9 458 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 PPP1R3BQ86XI6 285 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 AOPEPQ8N6M6 819 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 SEC14L1Q92503 715 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 ZDHHC12Q96GR4 267 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 SYT11Q9BT88 431 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 ZNF768Q9H5H4 540 aaKnown RBP14.06□□□□□ -0.16
VARS-228ENST00000495010 HAUS4Q9H6D7 363 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 RBM22Q9NW64 420 aaKnown RBP eCLIP14.06□□□□□ -0.16
VARS-228ENST00000495010 ATXN10Q9UBB4 475 aa14.06□□□□□ -0.16
VARS-228ENST00000495010 RPL26L1Q9UNX3 145 aaKnown RBP14.06□□□□□ -0.16
VARS-228ENST00000495010 RGSL1A5PLK6 1076 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 FADS2P1A8MWK0 482 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 SLC25A14O95258 325 aaPredicted RBP14.05□□□□□ -0.16
VARS-228ENST00000495010 RECKO95980 971 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 FGF5P12034 268 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 ZNF8P17098 575 aaPredicted RBP14.05□□□□□ -0.16
VARS-228ENST00000495010 SSR1P43307 286 aaKnown RBP14.05□□□□□ -0.16
VARS-228ENST00000495010 CLCNKAP51800 687 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 UBE2IP63279 158 aaKnown RBP14.05□□□□□ -0.16
VARS-228ENST00000495010 SEMA5AQ13591 1074 aa14.05□□□□□ -0.16
VARS-228ENST00000495010 PIGHQ14442 188 aaPredicted RBP14.05□□□□□ -0.16
VARS-228ENST00000495010 PLA2G4EQ3MJ16 856 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms