RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 SNX2O60749 519 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 AGTP01019 485 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 PYGMP11217 842 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 CD1CP29017 333 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 CSF2RBP32927 897 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 CTNNA1P35221 906 aaKnown RBP10.51□□□□□ -0.73
NELFE-213ENST00000494956 ERVPABLB-1P60509 514 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 OTUD4Q01804 1114 aaKnown RBP10.51□□□□□ -0.73
NELFE-213ENST00000494956 ZFP36L1Q07352 338 aaKnown RBP10.51□□□□□ -0.73
NELFE-213ENST00000494956 C16orf72Q14CZ0 275 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 MAP9Q49MG5 647 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 SIRPB2Q5JXA9 342 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 PHF19Q5T6S3 580 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 BBS12Q6ZW61 710 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 ZNF438Q7Z4V0 828 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 ADGRG6Q86SQ4 1221 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 JAMLQ86YT9 394 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 SLITRK4Q8IW52 837 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 LSMEM2Q8N112 164 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 TTC30BQ8N4P2 665 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 LRRC57Q8N9N7 239 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 ZNF248Q8NDW4 579 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 IPMKQ8NFU5 416 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 OR6C4Q8NGE1 309 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 WDR48Q8TAF3 677 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 ACTL9Q8TC94 416 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 SLC37A2Q8TED4 501 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 NAT14Q8WUY8 206 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 KCNE4Q8WWG9 221 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 HTR3CQ8WXA8 447 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 LIN37Q96GY3 246 aaPredicted RBP10.51□□□□□ -0.73
NELFE-213ENST00000494956 RBM41Q96IZ5 413 aaKnown RBP10.51□□□□□ -0.73
NELFE-213ENST00000494956 FCRL3Q96P31 734 aaPredicted RBP10.51□□□□□ -0.73
NELFE-213ENST00000494956 BAG1Q99933 345 aaPredicted RBP10.51□□□□□ -0.73
NELFE-213ENST00000494956 APOL2Q9BQE5 337 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 ANP32EQ9BTT0 268 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 PRORYQ9H606 182 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 MAGEE1Q9HCI5 957 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 THSD1Q9NS62 852 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 TBC1D29Q9UFV1 150 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 SLC23A2Q9UGH3 650 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 LOXL2Q9Y4K0 774 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 PCDHGA8Q9Y5G5 932 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 PCDHA3Q9Y5H8 950 aa10.51□□□□□ -0.73
NELFE-213ENST00000494956 LOC285095A0A1B0GVY8 99 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 PJA2O43164 708 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 GRID2O43424 1007 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 NUAK1O60285 661 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 SLC25A14O95258 325 aaPredicted RBP10.5□□□□□ -0.73
NELFE-213ENST00000494956 FTCDO95954 541 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 PRB1P04280 392 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 PYGLP06737 847 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 CCL4P13236 92 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 PNLIPP16233 465 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 CTNNA2P26232 953 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 SLC5A2P31639 672 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 CCKBRP32239 447 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 VAV2P52735 878 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 MAPK10P53779 464 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 BIRC2Q13490 618 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 TGIF1Q15583 401 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 SLC14A2Q15849 920 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 PPP2R5EQ16537 467 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 ZNF569Q5MCW4 686 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 ARHGAP40Q5TG30 622 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 CCDC181Q5TID7 509 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 BZW1Q7L1Q6 419 aaKnown RBP10.5□□□□□ -0.73
NELFE-213ENST00000494956 KIAA1328Q86T90 577 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 TRAM1L1Q8N609 369 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 BLOC1S5Q8TDH9 187 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 PMEPA1Q969W9 287 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 TMEM74Q96NL1 305 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 FCRL5Q96RD9 977 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 FICDQ9BVA6 458 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 OSBPL8Q9BZF1 889 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 LUC7LQ9NQ29 371 aaKnown RBP10.5□□□□□ -0.73
NELFE-213ENST00000494956 PRDM8Q9NQV8 689 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 SCHIP1Q9P0W5 487 aaPredicted RBP10.5□□□□□ -0.73
NELFE-213ENST00000494956 VPS18Q9P253 973 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 RSPH14Q9UHP6 348 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 DNAJC16Q9Y2G8 782 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.5□□□□□ -0.73
NELFE-213ENST00000494956 ADGRG1Q9Y653 693 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 BPTFQ12830 3046 aa10.5□□□□□ -0.73
NELFE-213ENST00000494956 LAMA5O15230 3695 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 IGHV1OR21-1A0A087WYE8 117 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 PRAMEF33A0A0G2JMD5 474 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 IGHV5-10-1A0A0J9YXX1 117 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 HACD1B0YJ81 288 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 APOC4-APOC2K7ER74 178 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A9O60656 530 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 PRAMEF10O60809 474 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 APOC2P02655 101 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 ITGA2BP08514 1039 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A6P19224 532 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A1P22309 533 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A4P22310 534 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 PSMB4P28070 264 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 UGT1A3P35503 534 aa10.49□□□□□ -0.73
NELFE-213ENST00000494956 PPM1FP49593 454 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms