RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 A0A0A6YYK5 440 aaPredicted RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 PRAMEF33A0A0G2JMD5 474 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 IGHV5-10-1A0A0J9YXX1 117 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 RGSL1A5PLK6 1076 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 C9orf172C9J069 976 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 NVLO15381 856 aaKnown RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 ZW10O43264 779 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 GRID2O43424 1007 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 NUAK1O60285 661 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 PRAMEF10O60809 474 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 ZRANB2O95218 330 aaKnown RBP eCLIP9.5□□□□□ -0.89
MSH5-218ENST00000494646 ACP5P13686 325 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 ZNF8P17098 575 aaPredicted RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 BPIP17213 487 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 CD68P34810 354 aaPredicted RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 GPR3P46089 330 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 MARCKSL1P49006 195 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 NR2C2P49116 596 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 UCNP55089 124 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 WASHC5Q12768 1159 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 NFATC2Q13469 925 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 TFDP2Q14188 446 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 NOMO1Q15155 1222 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 SNAP47Q5SQN1 464 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 BZW1Q7L1Q6 419 aaKnown RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 PID1Q7Z2X4 250 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 ZNF438Q7Z4V0 828 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 VSIG1Q86XK7 387 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 RAVER1Q8IY67 606 aaKnown RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 SLC25A41Q8N5S1 370 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 SLC37A2Q8TED4 501 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 TFB1MQ8WVM0 346 aaKnown RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 JPH3Q8WXH2 748 aaPredicted RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 AHCYL2Q96HN2 611 aaKnown RBP9.5□□□□□ -0.89
MSH5-218ENST00000494646 CCDC74BQ96LY2 380 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 OR2AG1Q9H205 316 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 MAGEE1Q9HCI5 957 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 PRDM8Q9NQV8 689 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 KCNK4Q9NYG8 393 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 TMEM9Q9P0T7 183 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 ZNF711Q9Y462 761 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 PCDHGA7Q9Y5G6 932 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 K7ENP7 123 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 PSTPIP1O43586 416 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 BUD23O43709 281 aaKnown RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 MTX2O75431 263 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 LCA5LO95447 670 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 NDST3O95803 873 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 NFKB1P19838 968 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 CYLC1P35663 651 aaPredicted RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 CHRNA4P43681 627 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 MAPK9P45984 424 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 LIMK2P53671 638 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 NAP1L1P55209 391 aaKnown RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 C19orf57Q0VDD7 668 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 LY6DQ14210 128 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 NR1D2Q14995 579 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 PRKD1Q15139 912 aaPredicted RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 SPA17Q15506 151 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 TAZQ16635 292 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 PLA2G4EQ3MJ16 856 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 IYDQ6PHW0 289 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 INO80CQ6PI98 192 aaPredicted RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 SARM1Q6SZW1 724 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 ADGRG6Q86SQ4 1221 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 DAAM2Q86T65 1068 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 RCOR2Q8IZ40 523 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 ZNF567Q8N184 647 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 SFRP1Q8N474 314 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 TRAM1L1Q8N609 369 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 NCSTNQ92542 709 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 KRT35Q92764 455 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 P3H4Q92791 437 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 TMEM159Q96B96 161 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 TADA1Q96BN2 335 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 CCNL2Q96S94 520 aaPredicted RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 TBC1D10AQ9BXI6 508 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 RBSNQ9H1K0 784 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 TRIM39Q9HCM9 518 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 KLC4Q9NSK0 619 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 OCIAD1Q9NX40 245 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 FOXJ2Q9P0K8 574 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 AKAP7Q9P0M2 348 aaPredicted RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 VPS18Q9P253 973 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 KLHL8Q9P2G9 620 aaPredicted RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 SLC23A2Q9UGH3 650 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 FAM153AQ9UHL3 310 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 EPN1Q9Y6I3 576 aaPredicted RBP9.49□□□□□ -0.89
MSH5-218ENST00000494646 DUSP10Q9Y6W6 482 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 CFAP46Q8IYW2 2715 aa9.49□□□□□ -0.89
MSH5-218ENST00000494646 hCG_1818297A0A087WSY0 165 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 LOC285095A0A1B0GVY8 99 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 RCCD1A6NED2 376 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 SOWAHDA6NJG2 315 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 H7C0C1 242 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 UGT1A9O60656 530 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 C1QL1O75973 258 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 LIPCP11150 499 aa9.48□□□□□ -0.89
MSH5-218ENST00000494646 FGF3P11487 239 aaPredicted RBP9.48□□□□□ -0.89
MSH5-218ENST00000494646 UGT1A6P19224 532 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms